Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing gcvT gene

Properties
Regulog: GcvA - Shewanellaceae
Regulator type: Transcription factor
Regulator family: LysR
Regulation mode: activator (repressor)
Biological process: Glycine metabolism
Effector: Glycine
Phylum: Proteobacteria/gamma
Built upon 108 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -141
Score: 5.21552
Sequence: ATAAGAAAAACTAAT
Locus tag: Sama_2721
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Sama_2720
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: Sama_2719
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP -141 5.2 ATAAGAAAAACTAAT Sama_2721
Shewanella baltica OS155
Position: -348
Score: 5.46777
Sequence: ATGAGAAAATCTAAT
Locus tag: Sbal_0617
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Sbal_0618
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: Sbal_0619
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP -348 5.5 ATGAGAAAATCTAAT Sbal_0617
Shewanella denitrificans OS217
Position: -142
Score: 5.55768
Sequence: ATTAGTAAAACTAAT
Locus tag: Sden_0833
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Sden_0834
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: Sden_0835
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP -142 5.6 ATTAGTAAAACTAAT Sden_0833
Shewanella frigidimarina NCIMB 400
Position: -131
Score: 5.20621
Sequence: ATTAGCTAAACTAAT
Locus tag: Sfri_3151
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Sfri_3150
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: Sfri_3149
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP -131 5.2 ATTAGCTAAACTAAT Sfri_3151
Shewanella halifaxensis HAW-EB4
Position: -213
Score: 5.39337
Sequence: ATGAGAAAAACTAAT
Locus tag: Shal_3375
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Shal_3374
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: Shal_3373
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP -213 5.4 ATGAGAAAAACTAAT Shal_3375
Shewanella loihica PV-4
Position: -371
Score: 4.76449
Sequence: ATGAGAAAAAGTAAT
Locus tag: Shew_3064
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Shew_3063
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: Shew_3062
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP -371 4.8 ATGAGAAAAAGTAAT Shew_3064
Shewanella oneidensis MR-1
Position: -296
Score: 5.46777
Sequence: ATGAGAAAATCTAAT
Locus tag: SO_0779
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: SO_0780
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: SO_0781
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP -296 5.5 ATGAGAAAATCTAAT SO_0779
Shewanella pealeana ATCC 700345
Position: -233
Score: 5.39337
Sequence: ATGAGAAAAACTAAT
Locus tag: Spea_3303
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Spea_3302
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: Spea_3301
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP -233 5.4 ATGAGAAAAACTAAT Spea_3303
Shewanella piezotolerans WP3
Position: -163
Score: 5.39337
Sequence: ATGAGAAAAACTAAT
Locus tag: swp_0913
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: swp_0914
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: swp_0915
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP -163 5.4 ATGAGAAAAACTAAT swp_0913
Shewanella putrefaciens CN-32
Position: -152
Score: 5.46777
Sequence: ATGAGAAAATCTAAT
Locus tag: Sputcn32_3211
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Sputcn32_3210
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: Sputcn32_3209
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP -152 5.5 ATGAGAAAATCTAAT Sputcn32_3211
Shewanella sediminis HAW-EB3
Position: -213
Score: 4.76449
Sequence: ATGAGAAAAAGTAAT
Locus tag: Ssed_3675
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Ssed_3674
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: Ssed_3673
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP -213 4.8 ATGAGAAAAAGTAAT Ssed_3675
Shewanella sp ANA-3
Position: -296
Score: 5.46777
Sequence: ATGAGAAAATCTAAT
Locus tag: Shewana3_3501
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Shewana3_3500
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: Shewana3_3499
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP -296 5.5 ATGAGAAAATCTAAT Shewana3_3501
Shewanella sp MR-4
Position: -298
Score: 5.46777
Sequence: ATGAGAAAATCTAAT
Locus tag: Shewmr4_3331
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Shewmr4_3330
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: Shewmr4_3329
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP -298 5.5 ATGAGAAAATCTAAT Shewmr4_3331
Shewanella sp MR-7
Position: -297
Score: 5.46777
Sequence: ATGAGAAAATCTAAT
Locus tag: Shewmr7_0622
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Shewmr7_0623
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: Shewmr7_0624
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP -297 5.5 ATGAGAAAATCTAAT Shewmr7_0622
Shewanella sp W3-18-1
Position: -152
Score: 5.46777
Sequence: ATGAGAAAATCTAAT
Locus tag: Sputw3181_0730
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Sputw3181_0731
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: Sputw3181_0732
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP -152 5.5 ATGAGAAAATCTAAT Sputw3181_0730
Shewanella woodyi ATCC 51908
Position: -229
Score: 4.76449
Sequence: ATGAGAAAAAGTAAT
Locus tag: Swoo_3969
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Swoo_3968
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: Swoo_3967
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP -229 4.8 ATGAGAAAAAGTAAT Swoo_3969
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