Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing calR gene

Properties
Regulog: CalR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Utilization of aromatic compounds
Effector:
Phylum: Proteobacteria/gamma
Built upon 16 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -43
Score: 7.08924
Sequence: GACCGACTAATCAGTCGGTT
Locus tag: Sama_2855
Name: calB
Funciton: Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68)
Locus tag: Sama_2856
Name: calR
Funciton: Transcriptional regulator, TetR family
calB-calR -43 7.1 GACCGACTAATCAGTCGGTT Sama_2855
Shewanella baltica OS155
Position: -125
Score: 6.89353
Sequence: AACCGACTAATCAGTCGGTA
Locus tag: Sbal_3332
Name: calB
Funciton: Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68)
Locus tag: Sbal_3333
Name: calR
Funciton: Transcriptional regulator, TetR family
calB-calR -125 6.9 AACCGACTAATCAGTCGGTA Sbal_3332
Shewanella denitrificans OS217
Position: -45
Score: 6.84078
Sequence: ACCCGACTGATTAGTCGGTT
Locus tag: Sden_0975
Name: calB
Funciton: Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68)
Locus tag: Sden_0974
Name: calR
Funciton: Transcriptional regulator, TetR family
calB-calR -45 6.8 ACCCGACTGATTAGTCGGTT Sden_0975
Shewanella frigidimarina NCIMB 400
Position: -82
Score: 7.08924
Sequence: GACCGACTAATCAGTCGGTT
Locus tag: Sfri_0937
Name: calB
Funciton: Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68)
Locus tag: Sfri_0936
Name: calR
Funciton: Transcriptional regulator, TetR family
calB-calR -82 7.1 GACCGACTAATCAGTCGGTT Sfri_0937
Shewanella halifaxensis HAW-EB4
Position: -49
Score: 6.96148
Sequence: GACCGACTAATCAGTCGGTC
Locus tag: Shal_3429
Name: calB
Funciton: Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68)
Locus tag: Shal_3430
Name: calR
Funciton: Transcriptional regulator, TetR family
calB-calR -49 7 GACCGACTAATCAGTCGGTC Shal_3429
Shewanella loihica PV-4
Position: -127
Score: 7.08924
Sequence: GACCGACTAATCAGTCGGTT
Locus tag: Shew_3103
Name: calB
Funciton: Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68)
Locus tag: Shew_3104
Name: calR
Funciton: Transcriptional regulator, TetR family
calB-calR -127 7.1 GACCGACTAATCAGTCGGTT Shew_3103
Shewanella oneidensis MR-1
Position: -78
Score: 7.21699
Sequence: AACCGACTAATCAGTCGGTT
Locus tag: SO_3683
Name: calB
Funciton: Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68)
Locus tag: SO_3684
Name: calR
Funciton: Transcriptional regulator, TetR family
calB-calR -78 7.2 AACCGACTAATCAGTCGGTT SO_3683
Shewanella pealeana ATCC 700345
Position: -49
Score: 7.08924
Sequence: GACCGACTAATCAGTCGGTT
Locus tag: Spea_3357
Name: calB
Funciton: Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68)
Locus tag: Spea_3358
Name: calR
Funciton: Transcriptional regulator, TetR family
calB-calR -49 7.1 GACCGACTAATCAGTCGGTT Spea_3357
Shewanella piezotolerans WP3
Position: -50
Score: 7.08924
Sequence: GACCGACTAATCAGTCGGTT
Locus tag: swp_1052
Name: calB
Funciton: Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68)
Locus tag: swp_1051
Name: calR
Funciton: Transcriptional regulator, TetR family
calB-calR -50 7.1 GACCGACTAATCAGTCGGTT swp_1052
Shewanella putrefaciens CN-32
Position: -104
Score: 6.89353
Sequence: AACCGACTAATCAGTCGGTA
Locus tag: Sputcn32_2982
Name: calB
Funciton: Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68)
Locus tag: Sputcn32_2983
Name: calR
Funciton: Transcriptional regulator, TetR family
calB-calR -104 6.9 AACCGACTAATCAGTCGGTA Sputcn32_2982
Shewanella sediminis HAW-EB3
Position: -203
Score: 7.08924
Sequence: GACCGACTAATCAGTCGGTT
Locus tag: Ssed_3716
Name: calB
Funciton: Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68)
Locus tag: Ssed_3717
Name: calR
Funciton: Transcriptional regulator, TetR family
calB-calR -203 7.1 GACCGACTAATCAGTCGGTT Ssed_3716
Shewanella sp ANA-3
Position: -78
Score: 7.21699
Sequence: AACCGACTAATCAGTCGGTT
Locus tag: Shewana3_3251
Name: calB
Funciton: Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68)
Locus tag: Shewana3_3252
Name: calR
Funciton: Transcriptional regulator, TetR family
calB-calR -78 7.2 AACCGACTAATCAGTCGGTT Shewana3_3251
Shewanella sp MR-4
Position: -78
Score: 7.21699
Sequence: AACCGACTAATCAGTCGGTT
Locus tag: Shewmr4_0872
Name: calB
Funciton: Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68)
Locus tag: Shewmr4_0871
Name: calR
Funciton: Transcriptional regulator, TetR family
calB-calR -78 7.2 AACCGACTAATCAGTCGGTT Shewmr4_0872
Shewanella sp MR-7
Position: -78
Score: 7.21699
Sequence: AACCGACTAATCAGTCGGTT
Locus tag: Shewmr7_3150
Name: calB
Funciton: Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68)
Locus tag: Shewmr7_3151
Name: calR
Funciton: Transcriptional regulator, TetR family
calB-calR -78 7.2 AACCGACTAATCAGTCGGTT Shewmr7_3150
Shewanella sp W3-18-1
Position: -104
Score: 6.89353
Sequence: AACCGACTAATCAGTCGGTA
Locus tag: Sputw3181_0965
Name: calB
Funciton: Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68)
Locus tag: Sputw3181_0964
Name: calR
Funciton: Transcriptional regulator, TetR family
calB-calR -104 6.9 AACCGACTAATCAGTCGGTA Sputw3181_0965
Shewanella woodyi ATCC 51908
Position: -77
Score: 6.55484
Sequence: GACCGACCAATCAGTCGGTT
Locus tag: Swoo_4064
Name: calB
Funciton: Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68)
Locus tag: Swoo_4065
Name: calR
Funciton: Transcriptional regulator, TetR family
calB-calR -77 6.6 GACCGACCAATCAGTCGGTT Swoo_4064
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