Orthologous regulated operons containing liuC gene
| Regulog: | LiuR - Pseudomonadaceae |
| Regulator type: | Transcription factor |
| Regulator family: | MerR |
| Regulation mode: | repressor |
| Biological process: | Branched-chain amino acid degradation |
| Effector: | |
| Phylum: | Proteobacteria/gamma |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Azotobacter vinelandii AvOP | ||||
|
Position: -38
Score: 6.33972 Sequence: GTTTACGTTTACGTAAAG
Position: -32
Score: 5.36161 Sequence: GTTTACGTAAAGGTAATA
Locus tag: Avin_49570
Name: liuR Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
Locus tag: Avin_49560
Name: liuA Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10)
Locus tag: Avin_49550
Name: liuB Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Locus tag: Avin_49530
Name: liuC Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
Locus tag: Avin_49520
Name: liuD Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
Locus tag: Avin_49510
Name: liuE Funciton: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) |
||||
| liuR-liuA-liuB-liuC-liuD-liuE | -38 | 6.3 | GTTTACGTTTACGTAAAG | Avin_49570 |
| -32 | 5.4 | GTTTACGTAAAGGTAATA | ||
| Pseudomonas aeruginosa PAO1 | ||||
|
Position: -40
Score: 6.53232 Sequence: CTTTACGTTAACGTAAAG
Position: -34
Score: 5.46454 Sequence: GTTAACGTAAAGGTAAAC
Locus tag: PA2016
Name: liuR Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
Locus tag: PA2015
Name: liuA Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10)
Locus tag: PA2014
Name: liuB Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Locus tag: PA2013
Name: liuC Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
Locus tag: PA2012
Name: liuD Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
Locus tag: PA2011
Name: liuE Funciton: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) |
||||
| liuR-liuA-liuB-liuC-liuD-liuE | -40 | 6.5 | CTTTACGTTAACGTAAAG | PA2016 |
| -34 | 5.5 | GTTAACGTAAAGGTAAAC | ||
| Pseudomonas entomophila L48 | ||||
|
Position: -223
Score: 5.92222 Sequence: ATTTACGTTTACGTAAAG
Position: -217
Score: 5.14911 Sequence: GTTTACGTAAAGGTTATG
Position: -173
Score: 6.18168 Sequence: GTTTACGTTAACGTCAAC
Locus tag: PSEEN3386
Name: liuA Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10)
Locus tag: PSEEN3387
Name: liuB Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Locus tag: PSEEN3388
Name: liuC Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
Locus tag: PSEEN3389
Name: liuD Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) |
||||
| liuA-liuB-liuC-liuD | -223 | 5.9 | ATTTACGTTTACGTAAAG | PSEEN3386 |
| -217 | 5.1 | GTTTACGTAAAGGTTATG | ||
| -173 | 6.2 | GTTTACGTTAACGTCAAC | ||
| Pseudomonas fluorescens Pf-5 | ||||
|
Position: -131
Score: 6.0297 Sequence: GTTGACGTTTACGTAAAG
Position: -88
Score: 6.51201 Sequence: GTTTACGTTAACGTAAAG
Locus tag: PFL_3936
Name: liuA Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10)
Locus tag: PFL_3937
Name: liuB Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Locus tag: PFL_3938
Name: liuC Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
Locus tag: PFL_3939
Name: liuD Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) |
||||
| liuA-liuB-liuC-liuD | -131 | 6 | GTTGACGTTTACGTAAAG | PFL_3936 |
| -88 | 6.5 | GTTTACGTTAACGTAAAG | ||
| Pseudomonas mendocina ymp | ||||
|
Position: -29
Score: 6.51201 Sequence: GTTTACGTTAACGTAAAG
Position: -23
Score: 5.46454 Sequence: GTTAACGTAAAGGTAAAC
Locus tag: Pmen_2034
Name: liuR Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
Locus tag: Pmen_2033
Name: liuA Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10)
Locus tag: Pmen_2032
Name: liuB Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Locus tag: Pmen_2031
Name: liuC Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
Locus tag: Pmen_2030
Name: liuD Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
Locus tag: Pmen_2029
Name: liuE Funciton: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) |
||||
| liuR-liuA-liuB-liuC-liuD-liuE | -29 | 6.5 | GTTTACGTTAACGTAAAG | Pmen_2034 |
| -23 | 5.5 | GTTAACGTAAAGGTAAAC | ||
| Pseudomonas putida KT2440 | ||||
|
Position: -148
Score: 5.92222 Sequence: ATTTACGTTTACGTAAAG
Position: -97
Score: 6.51201 Sequence: GTTTACGTTAACGTAAAG
Locus tag: PP4064
Name: liuA Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10)
Locus tag: PP4065
Name: liuB Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Locus tag: PP4066
Name: liuC Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
Locus tag: PP4067
Name: liuD Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) |
||||
| liuA-liuB-liuC-liuD | -148 | 5.9 | ATTTACGTTTACGTAAAG | PP4064 |
| -97 | 6.5 | GTTTACGTTAACGTAAAG | ||
| Pseudomonas stutzeri A1501 | ||||
|
Position: -133
Score: 6.53232 Sequence: CTTTACGTTAACGTAAAG
Locus tag: PST_3213
Name: liuA Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10)
Locus tag: PST_3214
Name: liuB Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Locus tag: PST_3215
Name: liuC Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
Locus tag: PST_3216
Name: liuD Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
Locus tag: PST_3217
Name: liuE Funciton: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) |
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| liuA-liuB-liuC-liuD-liuE | -133 | 6.5 | CTTTACGTTAACGTAAAG | PST_3213 |
| Pseudomonas syringae pv. tomato str. DC3000 | ||||
|
Position: 109
Score: 6.51201 Sequence: gTTTACGTTAACGTAAAG
Locus tag: PSPTO2739
Name: liuA Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10)
Locus tag: PSPTO2738
Name: liuB Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Locus tag: PSPTO2737
Name: liuC Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
Locus tag: PSPTO2736
Name: liuD Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) |
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| liuA-liuB-liuC-liuD | 109 | 6.5 | gTTTACGTTAACGTAAAG | PSPTO2739 |