Orthologous regulated operons containing ahpD gene

Properties
Regulog:	LiuR - Oceanospirillales/Alteromonadales
Regulator type:	Transcription factor
Regulator family:	MerR
Regulation mode:	repressor
Biological process:	Branched-chain amino acid degradation
Effector:
Phylum:	Proteobacteria/gamma

Built upon 28 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Marinobacter sp. ELB17
Position: -51 Score: 6.33972 Sequence: CTTTACGTTTACGTAAAC Position: -45 Score: 5.16834 Sequence: GTTTACGTAAACTTTAAC Locus tag: MELB17_07889 Name: liuR Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family Locus tag: MELB17_07884 Name: liuA Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2) Locus tag: MELB17_07879 Name: liuB Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) Locus tag: MELB17_07874 Name: liuC Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) Locus tag: MELB17_07869 Name: liuD Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) Locus tag: MELB17_07864 Name: liuE Funciton: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) Locus tag: MELB17_07859 Name: ahpD Funciton: alkylhydroperoxidase AhpD family core domain protein Locus tag: MELB17_07854 Name: acs Funciton: acyl-CoA synthase
liuR-liuA-liuB-liuC-liuD-liuE-ahpD-acs	-51	6.3	CTTTACGTTTACGTAAAC	MELB17_07889
	-45	5.2	GTTTACGTAAACTTTAAC
Oceanospirillum sp. MED92
Position: -65 Score: 4.63226 Sequence: ATTGATCTTTACGTAAAC Position: -59 Score: 6.0297 Sequence: CTTTACGTAAACGTCAAC Locus tag: MED92_06078 Name: liuR Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family Locus tag: MED92_06073 Name: liuA Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2) Locus tag: MED92_06068 Name: liuB Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) Locus tag: MED92_06063 Name: liuC Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) Locus tag: MED92_06058 Name: liuD Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) Locus tag: MED92_06053 Name: liuE Funciton: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) Locus tag: MED92_06048 Name: ahpD Funciton: alkylhydroperoxidase AhpD family core domain protein Locus tag: MED92_06043 Name: acs Funciton: acyl-CoA synthase
liuR-liuA-liuB-liuC-liuD-liuE-ahpD-acs	-65	4.6	ATTGATCTTTACGTAAAC	MED92_06078
	-59	6	CTTTACGTAAACGTCAAC