Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing liuR gene

Properties
Regulog: LiuR - Oceanospirillales/Alteromonadales
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: repressor
Biological process: Branched-chain amino acid degradation
Effector:
Phylum: Proteobacteria/gamma
Built upon 28 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Alcanivorax borkumensis SK2
Position: -36
Score: 6.51201
Sequence: CTTTACGTTAACGTAAAC
Locus tag: ABO_1241
Name: liuR
Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
Locus tag: ABO_1240
Name: liuA
Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Locus tag: ABO_1239
Name: liuB
Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Locus tag: ABO_1238
Name: liuC
Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
Locus tag: ABO_1237
Name: liuD
Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
Locus tag: ABO_1236
Name: aacS
Funciton: Acetoacetyl-CoA synthetase (EC 6.2.1.16)
liuR-liuA-liuB-liuC-liuD-aacS -36 6.5 CTTTACGTTAACGTAAAC ABO_1241
Hahella chejuensis KCTC 2396
Position: -64
Score: 4.85339
Sequence: TATAACGTTGACGTAAAC
Position: -58
Score: 6.00939
Sequence: GTTGACGTAAACGTAAAC
Locus tag: HCH_03942
Name: liuR
Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
liuR -64 4.9 TATAACGTTGACGTAAAC HCH_03942
-58 6 GTTGACGTAAACGTAAAC
Marinobacter aqueolei
Position: -52
Score: 6.33972
Sequence: CTTTACGTTTACGTAAAC
Position: -46
Score: 5.16834
Sequence: GTTTACGTAAACTTTAAC
Locus tag: Maqu_2120
Name: liuR
Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
Locus tag: Maqu_2121
Name: liuA
Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
liuR-liuA -52 6.3 CTTTACGTTTACGTAAAC Maqu_2120
-46 5.2 GTTTACGTAAACTTTAAC
Marinobacter sp. ELB17
Position: -51
Score: 6.33972
Sequence: CTTTACGTTTACGTAAAC
Position: -45
Score: 5.16834
Sequence: GTTTACGTAAACTTTAAC
Locus tag: MELB17_07889
Name: liuR
Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
Locus tag: MELB17_07884
Name: liuA
Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Locus tag: MELB17_07879
Name: liuB
Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Locus tag: MELB17_07874
Name: liuC
Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
Locus tag: MELB17_07869
Name: liuD
Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
Locus tag: MELB17_07864
Name: liuE
Funciton: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
Locus tag: MELB17_07859
Name: ahpD
Funciton: alkylhydroperoxidase AhpD family core domain protein
Locus tag: MELB17_07854
Name: acs
Funciton: acyl-CoA synthase
liuR-liuA-liuB-liuC-liuD-liuE-ahpD-acs -51 6.3 CTTTACGTTTACGTAAAC MELB17_07889
-45 5.2 GTTTACGTAAACTTTAAC
Oceanospirillum sp. MED92
Position: -65
Score: 4.63226
Sequence: ATTGATCTTTACGTAAAC
Position: -59
Score: 6.0297
Sequence: CTTTACGTAAACGTCAAC
Locus tag: MED92_06078
Name: liuR
Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
Locus tag: MED92_06073
Name: liuA
Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Locus tag: MED92_06068
Name: liuB
Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Locus tag: MED92_06063
Name: liuC
Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
Locus tag: MED92_06058
Name: liuD
Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
Locus tag: MED92_06053
Name: liuE
Funciton: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
Locus tag: MED92_06048
Name: ahpD
Funciton: alkylhydroperoxidase AhpD family core domain protein
Locus tag: MED92_06043
Name: acs
Funciton: acyl-CoA synthase
liuR-liuA-liuB-liuC-liuD-liuE-ahpD-acs -65 4.6 ATTGATCTTTACGTAAAC MED92_06078
-59 6 CTTTACGTAAACGTCAAC
Reinekea sp. MED297
Position: -105
Score: 5.16834
Sequence: GTTTTCGTTTACGTTAAC
Position: -99
Score: 6.18168
Sequence: GTTTACGTTAACGTCAAC
Locus tag: MED297_07471
Name: liuR
Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
liuR -105 5.2 GTTTTCGTTTACGTTAAC MED297_07471
-99 6.2 GTTTACGTTAACGTCAAC
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