Orthologous regulated operons containing prpB gene
| Regulog: | PrpR - Oceanospirillales/Alteromonadales |
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Methylcitrate utilization |
| Effector: | 2-methylcitrate |
| Phylum: | Proteobacteria/gamma |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Alcanivorax borkumensis SK2 | ||||
|
Position: -86
Score: 5.37094 Sequence: ATTGTCAACAAT
Position: -23
Score: 5.37094 Sequence: ATTGTCAACAAT
Locus tag: ABO_1434
Name: prpR Funciton: Propionate catabolism transcriptional regulator, GntR family
Locus tag: ABO_1433
Name: prpB Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: ABO_1432
Name: prpC Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
Locus tag: ABO_1431
Name: acnD Funciton: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
Locus tag: ABO_1430
Name: prpF Funciton: Aconitase accessory protein PrpF
Locus tag: ABO_1429
Name: prpD Funciton: 2-methylcitrate dehydratase (EC 4.2.1.79) |
||||
| prpR-prpB-prpC-acnD-prpF-prpD | -86 | 5.4 | ATTGTCAACAAT | ABO_1434 |
| -23 | 5.4 | ATTGTCAACAAT | ||
| Chromohalobacter salexigens DSM 3043 | ||||
|
Position: -132
Score: 5.82454 Sequence: ATTGTCGACAAT
Position: -15
Score: 5.82454 Sequence: ATTGTCGACAAT
Locus tag: Csal_2422
Name: prpR Funciton: Propionate catabolism transcriptional regulator, GntR family
Locus tag: Csal_2421
Name: prpB Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: Csal_2420
Name: prpC Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
Locus tag: Csal_2419
Name: prpD Funciton: 2-methylcitrate dehydratase (EC 4.2.1.79) |
||||
| prpR-prpB-prpC-prpD | -132 | 5.8 | ATTGTCGACAAT | Csal_2422 |
| -15 | 5.8 | ATTGTCGACAAT | ||
| Hahella chejuensis KCTC 2396 | ||||
|
Position: -74
Score: 4.82561 Sequence: ATTGTTTACAAT
Position: -12
Score: 4.67165 Sequence: ATTGTAAACAAT
Locus tag: HCH_02709
Name: prpR Funciton: Propionate catabolism transcriptional regulator, GntR family
Locus tag: HCH_02710
Name: prpB Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: HCH_02711
Name: prpC Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
Locus tag: HCH_02712
Name: prpD Funciton: 2-methylcitrate dehydratase (EC 4.2.1.79) |
||||
| prpR-prpB-prpC-prpD | -74 | 4.8 | ATTGTTTACAAT | HCH_02709 |
| -12 | 4.7 | ATTGTAAACAAT | ||
| Marinobacter aqueolei | ||||
|
Position: -66
Score: 5.36427 Sequence: ATTGTTGACAAT
Position: -14
Score: 4.21805 Sequence: ATTGTTAACAAA
Locus tag: Maqu_1667
Name: prpR Funciton: Propionate catabolism transcriptional regulator, GntR family
Locus tag: Maqu_1666
Name: prpB Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: Maqu_1665
Name: prpC Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
Locus tag: Maqu_1664
Name: acnD Funciton: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
Locus tag: Maqu_1663
Name: prpF Funciton: Aconitase accessory protein PrpF
Locus tag: Maqu_1662
Name: prpD Funciton: 2-methylcitrate dehydratase (EC 4.2.1.79) |
||||
| prpR-prpB-prpC-acnD-prpF-prpD | -66 | 5.4 | ATTGTTGACAAT | Maqu_1667 |
| -14 | 4.2 | ATTGTTAACAAA | ||
| Marinobacter sp. ELB17 | ||||
|
Position: -65
Score: 5.36427 Sequence: ATTGTTGACAAT
Position: -14
Score: 4.21805 Sequence: ATTGTTAACAAA
Locus tag: MELB17_14501
Name: prpR Funciton: Propionate catabolism transcriptional regulator, GntR family
Locus tag: MELB17_14496
Name: prpB Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: MELB17_14491
Name: prpC Funciton: 2-methylcitrate synthase (EC 2.3.3.5) |
||||
| prpR-prpB-prpC | -65 | 5.4 | ATTGTTGACAAT | MELB17_14501 |
| -14 | 4.2 | ATTGTTAACAAA | ||
| Marinomonas sp. MWYL1 | ||||
|
Position: -268
Score: 4.68522 Sequence: ATTGTCGACACA
Position: -83
Score: 5.82454 Sequence: ATTGTCGACAAT
Position: -30
Score: 5.37094 Sequence: ATTGTCAACAAT
Locus tag: Mmwyl1_0926
Name: prpR Funciton: Propionate catabolism transcriptional regulator, GntR family
Locus tag: Mmwyl1_0925
Name: prpB Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: Mmwyl1_0924
Name: prpC Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
Locus tag: Mmwyl1_0923
Name: prpD Funciton: 2-methylcitrate dehydratase (EC 4.2.1.79) |
||||
| prpR-prpB-prpC-prpD | -268 | 4.7 | ATTGTCGACACA | Mmwyl1_0926 |
| -83 | 5.8 | ATTGTCGACAAT | ||
| -30 | 5.4 | ATTGTCAACAAT | ||
| Oceanobacter sp. RED65 | ||||
|
Position: -78
Score: 4.58659 Sequence: TTTGTCTACAAT
Position: -16
Score: 5.12525 Sequence: ATTGTAGACAAT
Locus tag: RED65_03680
Name: prpR Funciton: Propionate catabolism transcriptional regulator, GntR family
Locus tag: RED65_03675
Name: prpB Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: RED65_03670
Name: prpC Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
Locus tag: RED65_03665
Name: acnD Funciton: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
Locus tag: RED65_03660
Name: prpF Funciton: Aconitase accessory protein PrpF |
||||
| prpR-prpB-prpC-acnD-prpF | -78 | 4.6 | TTTGTCTACAAT | RED65_03680 |
| -16 | 5.1 | ATTGTAGACAAT | ||
| Oceanospirillum sp. MED92 | ||||
|
Position: -93
Score: 4.11965 Sequence: TGTGTTGACAAT
Position: -21
Score: 5.82454 Sequence: ATTGTCGACAAT
Locus tag: MED92_04442
Name: prpR Funciton: Propionate catabolism transcriptional regulator, GntR family
Locus tag: MED92_04447
Name: prpB Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: MED92_04452
Name: prpC Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
Locus tag: MED92_04457
Name: acnD Funciton: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79) |
||||
| prpR-prpB-prpC-acnD | -93 | 4.1 | TGTGTTGACAAT | MED92_04442 |
| -21 | 5.8 | ATTGTCGACAAT | ||
| Reinekea sp. MED297 | ||||
|
Position: -77
Score: 4.91067 Sequence: ATTGTTAACAAT
Position: -14
Score: 4.21805 Sequence: ATTGTTAACAAA
Locus tag: MED297_14280
Name: prpR Funciton: Propionate catabolism transcriptional regulator, GntR family
Locus tag: MED297_14285
Name: prpB Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: MED297_14290
Name: prpC Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
Locus tag: MED297_14295
Name: acnD Funciton: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
Locus tag: MED297_14300
Name: prpF Funciton: Aconitase accessory protein PrpF |
||||
| prpR-prpB-prpC-acnD-prpF | -77 | 4.9 | ATTGTTAACAAT | MED297_14280 |
| -14 | 4.2 | ATTGTTAACAAA | ||