Orthologous regulated operons containing umuD gene

Properties
Regulog:	LexA - Shewanellaceae
Regulator type:	Transcription factor
Regulator family:	LexA
Regulation mode:	repressor
Biological process:	SOS response
Effector:	DNA damage
Phylum:	Proteobacteria/gamma

Built upon 192 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Shewanella baltica OS155
Position: -30 Score: 5.64231 Sequence: TGCTGTATATAATTACAGTG Locus tag: Sbal_3554 Name: umuD Funciton: DNA polymerase V, subunit UmuD Locus tag: Sbal_3553 Name: umuC Funciton: DNA polymerase V, subunit UmuC
umuD-umuC	-30	5.6	TGCTGTATATAATTACAGTG	Sbal_3554
Shewanella denitrificans OS217
Position: -29 Score: 5.9556 Sequence: TACTGTATATAATTACAGTG Locus tag: Sden_3236 Name: umuD Funciton: DNA polymerase V, subunit UmuD Locus tag: Sden_3235 Name: umuC Funciton: DNA polymerase V, subunit UmuC
umuD-umuC	-29	6	TACTGTATATAATTACAGTG	Sden_3236
Shewanella frigidimarina NCIMB 400
Position: -58 Score: 5.91351 Sequence: TACTGTTTATTTATACAGTG Position: -43 Score: 4.80666 Sequence: CAGTGTGTTTTTATACAGTA Locus tag: Sfri_1963 Name: umuD Funciton: DNA polymerase V, subunit UmuD Locus tag: Sfri_1964 Name: umuC Funciton: DNA polymerase V, subunit UmuC
umuD-umuC	-58	5.9	TACTGTTTATTTATACAGTG	Sfri_1963
	-43	4.8	CAGTGTGTTTTTATACAGTA
Shewanella halifaxensis HAW-EB4
Position: -34 Score: 5.92564 Sequence: TACTGTATAAAAATACAGTG Locus tag: Shal_2184 Name: umuD Funciton: DNA polymerase V, subunit UmuD Locus tag: Shal_2183 Name: umuC Funciton: DNA polymerase V, subunit UmuC
umuD-umuC	-34	5.9	TACTGTATAAAAATACAGTG	Shal_2184
Shewanella oneidensis MR-1
Position: -32 Score: 5.63726 Sequence: AACTGTATATTTATACAGTT Locus tag: SO_A0013 Name: umuD Funciton: DNA polymerase V, subunit UmuD Locus tag: SO_A0012 Name: umuC Funciton: DNA polymerase V, subunit UmuC
umuD-umuC	-32	5.6	AACTGTATATTTATACAGTT	SO_A0013
Shewanella pealeana ATCC 700345
Position: -34 Score: 5.69919 Sequence: TACTGTATAAACATACAGTT Locus tag: Spea_2196 Name: umuD Funciton: DNA polymerase V, subunit UmuD Locus tag: Spea_2195 Name: umuC Funciton: DNA polymerase V, subunit UmuC
umuD-umuC	-34	5.7	TACTGTATAAACATACAGTT	Spea_2196
Shewanella putrefaciens CN-32
Position: -32 Score: 5.44547 Sequence: AACTGTATATTTGTACAGTT Locus tag: Sputcn32_0175 Name: umuD Funciton: DNA polymerase V, subunit UmuD
umuD	-32	5.4	AACTGTATATTTGTACAGTT	Sputcn32_0175
Shewanella sediminis HAW-EB3
Position: -39 Score: 6.14168 Sequence: TACTGTATATTTATACAGTA Locus tag: Ssed_2172 Name: umuD Funciton: DNA polymerase V, subunit UmuD Locus tag: Ssed_2171 Name: umuC Funciton: DNA polymerase V, subunit UmuC
umuD-umuC	-39	6.1	TACTGTATATTTATACAGTA	Ssed_2172
Shewanella sp ANA-3
Position: 14 Score: 6.03457 Sequence: TACTGTATTTACATACAGTA Locus tag: Shewana3_1833 Name: umuD Funciton: DNA polymerase V, subunit UmuD Locus tag: Shewana3_1832 Name: umuC Funciton: DNA polymerase V, subunit UmuC
umuD-umuC	14	6	TACTGTATTTACATACAGTA	Shewana3_1833
Shewanella sp MR-4
Position: 14 Score: 6.03306 Sequence: TACTGTACTTATATACAGTA Locus tag: Shewmr4_1782 Name: umuD Funciton: DNA polymerase V, subunit UmuD
umuD	14	6	TACTGTACTTATATACAGTA	Shewmr4_1782
Shewanella sp MR-7
Position: 14 Score: 6.22485 Sequence: TACTGTATTTATATACAGTA Locus tag: Shewmr7_2195 Name: umuD Funciton: DNA polymerase V, subunit UmuD Locus tag: Shewmr7_2196 Name: umuC Funciton: DNA polymerase V, subunit UmuC
umuD-umuC	14	6.2	TACTGTATTTATATACAGTA	Shewmr7_2195
Shewanella sp W3-18-1
Position: -46 Score: 5.856 Sequence: TACTGTATAAACAAACAGTA Locus tag: Sputw3181_1083 Name: umuD Funciton: DNA polymerase V, subunit UmuD Locus tag: Sputw3181_1082 Name: umuC Funciton: DNA polymerase V, subunit UmuC
umuD-umuC	-46	5.9	TACTGTATAAACAAACAGTA	Sputw3181_1083
Shewanella woodyi ATCC 51908
Position: -38 Score: 5.29774 Sequence: TACTGTATAAAAACACAGTT Locus tag: Swoo_2465 Name: umuD Funciton: DNA polymerase V, subunit UmuD Locus tag: Swoo_2466 Name: umuC Funciton: DNA polymerase V, subunit UmuC
umuD-umuC	-38	5.3	TACTGTATAAAAACACAGTT	Swoo_2465

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Orthologous regulated operons containing umuD gene

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --