Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing shmR gene

Properties
Regulog: RirA - Rhizobiales
Regulator type: Transcription factor
Regulator family: Rrf2
Regulation mode: repressor
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Phylum: Proteobacteria
Built upon 129 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Agrobacterium tumefaciens str. C58 (Cereon)
Position: -164
Score: 4.81479
Sequence: CATGATTCAAAAAGTCATA
Position: -137
Score: 4.62957
Sequence: GTTGACAGTGATCGTCATG
Locus tag: Atu2287
Name: shmR
Funciton: Outer membrane heme receptor, TonB-dependent
shmR -164 4.8 CATGATTCAAAAAGTCATA Atu2287
-137 4.6 GTTGACAGTGATCGTCATG
Bartonella quintana str. Toulouse
Position: -158
Score: 5.06208
Sequence: CTTGACTGCTTTTATCATG
Locus tag: BQ04160
Name: shmR
Funciton: Outer membrane heme receptor, TonB-dependent
shmR -158 5.1 CTTGACTGCTTTTATCATG BQ04160
Rhizobium etli CFN 42
Position: -179
Score: 4.13852
Sequence: CTTGATGGATTTGTTCAAG
Position: -143
Score: 5.08089
Sequence: GTTGACAACAGAAGTCATG
Locus tag: RHE_CH03076
Name: shmR
Funciton: Outer membrane heme receptor, TonB-dependent
shmR -179 4.1 CTTGATGGATTTGTTCAAG RHE_CH03076
-143 5.1 GTTGACAACAGAAGTCATG
Rhizobium leguminosarum bv. viciae 3841
Position: -180
Score: 4.8147
Sequence: CATGATAGATATATTCAAC
Position: -144
Score: 4.72699
Sequence: GTTGACAATGCTACTCATG
Locus tag: RL3522
Name: shmR
Funciton: Outer membrane heme receptor, TonB-dependent
shmR -180 4.8 CATGATAGATATATTCAAC RL3522
-144 4.7 GTTGACAATGCTACTCATG
Sinorhizobium meliloti 1021
Position: -141
Score: 4.32158
Sequence: ATTGACAATCACACTCATG
Position: -54
Score: 3.85743
Sequence: CTTGAGTTCGCCGCTCAAC
Locus tag: SMc02726
Name: shmR
Funciton: Outer membrane heme receptor, TonB-dependent
shmR -141 4.3 ATTGACAATCACACTCATG SMc02726
-54 3.9 CTTGAGTTCGCCGCTCAAC
© 2009-2020 RegPrecise