Orthologous regulated operons containing ubiD gene

Properties
Regulog:	NnrR - Rhizobiales
Regulator type:	Transcription factor
Regulator family:	CRP
Regulation mode:	activator
Biological process:	Denitrification
Effector:	Nitric oxide
Phylum:	Proteobacteria

Built upon 110 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Agrobacterium tumefaciens str. C58 (Cereon)
Position: -20 Score: 4.7112 Sequence: ATTTGCGGCAGCGCAAGG Locus tag: Atu4394 Name: ubiD Funciton: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-) Locus tag: Atu4393 Name: ubiX Funciton: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX (EC 4.1.1.-)
ubiD-ubiX	-20	4.7	ATTTGCGGCAGCGCAAGG	Atu4394
Bradyrhizobium japonicum USDA 110
Position: -15 Score: 4.19294 Sequence: ATTTGAGCGGGAACAATG Locus tag: blr7629 Name: ubiD Funciton: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-) Locus tag: blr7630 Name: ubiX Funciton: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX (EC 4.1.1.-)
ubiD-ubiX	-15	4.2	ATTTGAGCGGGAACAATG	blr7629
Mesorhizobium sp. BNC1
Position: -65 Score: 4.81419 Sequence: CTTTGCACTTCCGCAAAG Locus tag: Meso_4293 Name: ubiD Funciton: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-) Locus tag: Meso_4292 Name: ubiX Funciton: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX (EC 4.1.1.-)
ubiD-ubiX	-65	4.8	CTTTGCACTTCCGCAAAG	Meso_4293
Rhizobium sp. NGR234
Position: -50 Score: 5.14479 Sequence: ATTTGAGCCAGCGCAAAG Locus tag: NGR_c09810 Name: ubiD Funciton: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-)
ubiD	-50	5.1	ATTTGAGCCAGCGCAAAG	NGR_c09810
Rhodopseudomonas palustris CGA009
Position: -66 Score: 5.0959 Sequence: CTTTGCGCCTGATCAAAG Locus tag: RPA0931 Name: ubiD Funciton: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-) Locus tag: RPA0930 Name: ubiX Funciton: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX (EC 4.1.1.-)
ubiD-ubiX	-66	5.1	CTTTGCGCCTGATCAAAG	RPA0931
Sinorhizobium meliloti 1021
Position: -107 Score: 5.12865 Sequence: ATTTGCGCTGGAGCAAAG Locus tag: SMa1288 Name: ubiD Funciton: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-) Locus tag: SMa1285 Name: ubiX Funciton: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX (EC 4.1.1.-)
ubiD-ubiX	-107	5.1	ATTTGCGCTGGAGCAAAG	SMa1288