Orthologous regulated operons containing ubiD gene
| Regulog: | NnrR - Rhizobiales |
| Regulator type: | Transcription factor |
| Regulator family: | CRP |
| Regulation mode: | activator |
| Biological process: | Denitrification |
| Effector: | Nitric oxide |
| Phylum: | Proteobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Agrobacterium tumefaciens str. C58 (Cereon) | ||||
|
Position: -20
Score: 4.7112 Sequence: ATTTGCGGCAGCGCAAGG
Locus tag: Atu4394
Name: ubiD Funciton: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-)
Locus tag: Atu4393
Name: ubiX Funciton: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX (EC 4.1.1.-) |
||||
| ubiD-ubiX | -20 | 4.7 | ATTTGCGGCAGCGCAAGG | Atu4394 |
| Bradyrhizobium japonicum USDA 110 | ||||
|
Position: -15
Score: 4.19294 Sequence: ATTTGAGCGGGAACAATG
Locus tag: blr7629
Name: ubiD Funciton: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-)
Locus tag: blr7630
Name: ubiX Funciton: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX (EC 4.1.1.-) |
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| ubiD-ubiX | -15 | 4.2 | ATTTGAGCGGGAACAATG | blr7629 |
| Mesorhizobium sp. BNC1 | ||||
|
Position: -65
Score: 4.81419 Sequence: CTTTGCACTTCCGCAAAG
Locus tag: Meso_4293
Name: ubiD Funciton: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-)
Locus tag: Meso_4292
Name: ubiX Funciton: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX (EC 4.1.1.-) |
||||
| ubiD-ubiX | -65 | 4.8 | CTTTGCACTTCCGCAAAG | Meso_4293 |
| Rhizobium sp. NGR234 | ||||
|
Position: -50
Score: 5.14479 Sequence: ATTTGAGCCAGCGCAAAG
Locus tag: NGR_c09810
Name: ubiD Funciton: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-) |
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| ubiD | -50 | 5.1 | ATTTGAGCCAGCGCAAAG | NGR_c09810 |
| Rhodopseudomonas palustris CGA009 | ||||
|
Position: -66
Score: 5.0959 Sequence: CTTTGCGCCTGATCAAAG
Locus tag: RPA0931
Name: ubiD Funciton: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-)
Locus tag: RPA0930
Name: ubiX Funciton: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX (EC 4.1.1.-) |
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| ubiD-ubiX | -66 | 5.1 | CTTTGCGCCTGATCAAAG | RPA0931 |
| Sinorhizobium meliloti 1021 | ||||
|
Position: -107
Score: 5.12865 Sequence: ATTTGCGCTGGAGCAAAG
Locus tag: SMa1288
Name: ubiD Funciton: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-)
Locus tag: SMa1285
Name: ubiX Funciton: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX (EC 4.1.1.-) |
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| ubiD-ubiX | -107 | 5.1 | ATTTGCGCTGGAGCAAAG | SMa1288 |