Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing hex gene

Properties
Regulog: NagR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: N-acetylglucosamine utilization
Effector: N-acetylglucosamine
Phylum: Proteobacteria/gamma
Built upon 105 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -282
Score: 6.43696
Sequence: AATGACAGCGTTGTCATT
Locus tag: Sama_0941
Name: pilM
Funciton: homolog of type IV pilus assembly protein PilM
Locus tag: Sama_0942
Name: mcp_nag
Funciton: N-acetylglucosamine regulated methyl-accepting chemotaxis protein
Locus tag: Sama_0943
Name: hex
Funciton: Beta-hexosaminidase (EC 3.2.1.52)
pilM-mcp_nag-hex -282 6.4 AATGACAGCGTTGTCATT Sama_0941
Shewanella denitrificans OS217
Position: -243
Score: 6.04205
Sequence: ATTGACAACGCTGTCAAT
Locus tag: Sden_0553
Name: hex
Funciton: Beta-hexosaminidase (EC 3.2.1.52)
hex -243 6 ATTGACAACGCTGTCAAT Sden_0553
Shewanella halifaxensis HAW-EB4
Position: -344
Score: 6.12625
Sequence: CATGACAGCGTTGTCATC
Locus tag: Shal_1148
Name: hex
Funciton: Beta-hexosaminidase (EC 3.2.1.52)
hex -344 6.1 CATGACAGCGTTGTCATC Shal_1148
Shewanella oneidensis MR-1
Position: -437
Score: 4.99582
Sequence: ACTGACAGCGTTGTTATA
Position: -290
Score: 6.39555
Sequence: AATGACAACGCTGTCATC
Locus tag: SO_3510
Name: mcp_nag
Funciton: N-acetylglucosamine regulated methyl-accepting chemotaxis protein
Locus tag: SO_3509
Name: hex
Funciton: Beta-hexosaminidase (EC 3.2.1.52)
mcp_nag-hex -437 5 ACTGACAGCGTTGTTATA SO_3510
-290 6.4 AATGACAACGCTGTCATC
Shewanella pealeana ATCC 700345
Position: -334
Score: 6.39555
Sequence: AATGACAGCGTTGTCATC
Locus tag: Spea_1100
Name: hex
Funciton: Beta-hexosaminidase (EC 3.2.1.52)
hex -334 6.4 AATGACAGCGTTGTCATC Spea_1100
Shewanella piezotolerans WP3
Position: -277
Score: 5.89345
Sequence: TATGACAGCGTTGTCATC
Locus tag: swp_3707
Name: pilM
Funciton: homolog of type IV pilus assembly protein PilM
Locus tag: swp_3706
Name: mcp_nag
Funciton: N-acetylglucosamine regulated methyl-accepting chemotaxis protein
Locus tag: swp_3705
Name: hex
Funciton: Beta-hexosaminidase (EC 3.2.1.52)
pilM-mcp_nag-hex -277 5.9 TATGACAGCGTTGTCATC swp_3707
Shewanella putrefaciens CN-32
Position: -75
Score: 6.16766
Sequence: CATGACAGCGTTGTCATT
Locus tag: Sputcn32_1074
Name: omp_nag
Funciton: N-acetylglucosamine-regulated TonB-dependent outer membrane receptor
Locus tag: Sputcn32_1075
Name: hex
Funciton: Beta-hexosaminidase (EC 3.2.1.52)
omp_nag-hex -75 6.2 CATGACAGCGTTGTCATT Sputcn32_1074
Shewanella sediminis HAW-EB3
Position: -572
Score: 6.39555
Sequence: AATGACAGCGTTGTCATC
Locus tag: Ssed_1211
Name: hex
Funciton: Beta-hexosaminidase (EC 3.2.1.52)
hex -572 6.4 AATGACAGCGTTGTCATC Ssed_1211
Shewanella sp ANA-3
Position: -294
Score: 6.39555
Sequence: AATGACAACGCTGTCATC
Locus tag: Shewana3_3117
Name: pilM
Funciton: homolog of type IV pilus assembly protein PilM
Locus tag: Shewana3_3116
Name: mcp_nag
Funciton: N-acetylglucosamine regulated methyl-accepting chemotaxis protein
Locus tag: Shewana3_3115
Name: hex
Funciton: Beta-hexosaminidase (EC 3.2.1.52)
pilM-mcp_nag-hex -294 6.4 AATGACAACGCTGTCATC Shewana3_3117
Shewanella sp MR-4
Position: -294
Score: 6.39555
Sequence: AATGACAACGCTGTCATC
Locus tag: Shewmr4_2938
Name: pilM
Funciton: homolog of type IV pilus assembly protein PilM
Locus tag: Shewmr4_2937
Name: mcp_nag
Funciton: N-acetylglucosamine regulated methyl-accepting chemotaxis protein
Locus tag: Shewmr4_2936
Name: hex
Funciton: Beta-hexosaminidase (EC 3.2.1.52)
pilM-mcp_nag-hex -294 6.4 AATGACAACGCTGTCATC Shewmr4_2938
Shewanella sp MR-7
Position: -294
Score: 6.39555
Sequence: AATGACAACGCTGTCATC
Locus tag: Shewmr7_3020
Name: pilM
Funciton: homolog of type IV pilus assembly protein PilM
Locus tag: Shewmr7_3019
Name: mcp_nag
Funciton: N-acetylglucosamine regulated methyl-accepting chemotaxis protein
Locus tag: Shewmr7_3018
Name: hex
Funciton: Beta-hexosaminidase (EC 3.2.1.52)
pilM-mcp_nag-hex -294 6.4 AATGACAACGCTGTCATC Shewmr7_3020
Shewanella sp W3-18-1
Position: -75
Score: 6.16766
Sequence: CATGACAGCGTTGTCATT
Locus tag: Sputw3181_3091
Name: omp_nag
Funciton: N-acetylglucosamine-regulated TonB-dependent outer membrane receptor
Locus tag: Sputw3181_3090
Name: hex
Funciton: Beta-hexosaminidase (EC 3.2.1.52)
omp_nag-hex -75 6.2 CATGACAGCGTTGTCATT Sputw3181_3091
Shewanella woodyi ATCC 51908
Position: -311
Score: 6.39555
Sequence: AATGACAGCGTTGTCATC
Locus tag: Swoo_1309
Name: pilM
Funciton: homolog of type IV pilus assembly protein PilM
Locus tag: Swoo_1310
Name: mcp_nag
Funciton: N-acetylglucosamine regulated methyl-accepting chemotaxis protein
Locus tag: Swoo_1311
Name: hex
Funciton: Beta-hexosaminidase (EC 3.2.1.52)
pilM-mcp_nag-hex -311 6.4 AATGACAGCGTTGTCATC Swoo_1309
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