Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ndhD gene

Properties
Regulog: PedR - Cyanobacteria
Regulator type: Transcription factor
Regulator family: LuxR
Regulation mode: repressor (activator)
Biological process: Photosynthesis; Carbon fixation
Effector: Trx, thioredoxin protein
Phylum: Cyanobacteria
Built upon 56 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Cyanothece sp. ATCC 51142
Position: -19
Score: 4.22604
Sequence: GAGTATTTATTCCT
Locus tag: cce_3522
Name: ndhD
Funciton: NADH dehydrogenase subunit
ndhD -19 4.2 GAGTATTTATTCCT cce_3522
Nostoc sp. PCC 7120
Position: -160
Score: 4.22604
Sequence: GAGTATTTATTCCT
Position: -119
Score: 4.06046
Sequence: GAGTATAAATTCCT
Position: -59
Score: 4.31105
Sequence: AAGTAACAATTCCT
Locus tag: alr0348
Name: ndhD
Funciton: NADH dehydrogenase subunit
ndhD -160 4.2 GAGTATTTATTCCT alr0348
-119 4.1 GAGTATAAATTCCT
-59 4.3 AAGTAACAATTCCT
Prochlorococcus marinus str. MIT 9313
Position: -155
Score: 4.1608
Sequence: GAGTAGATATACTC
Locus tag: PMT0427
Name: ndhD
Funciton: NADH dehydrogenase subunit
ndhD -155 4.2 GAGTAGATATACTC PMT0427
Synechococcus elongatus PCC 7942
Position: -87
Score: 4.364
Sequence: GAGTATTTTTACTC
Position: -42
Score: 4.16807
Sequence: AAGCAAATCTGCTT
Locus tag: Synpcc7942_1439
Name: ndhD
Funciton: NADH dehydrogenase subunit
ndhD -87 4.4 GAGTATTTTTACTC Synpcc7942_1439
-42 4.2 AAGCAAATCTGCTT
Synechococcus sp. JA-3-3Ab
Position: -18
Score: 4.0115
Sequence: GAGTATTTATTCCC
Locus tag: CYA_0520
Name: ndhD
Funciton: NADH dehydrogenase subunit
ndhD -18 4 GAGTATTTATTCCC CYA_0520
Synechococcus sp. PCC 7002
Position: -20
Score: 4.53896
Sequence: AAGTATTTTTTCCT
Locus tag: SYNPCC7002_A1973
Name: ndhD
Funciton: NADH dehydrogenase subunit
ndhD -20 4.5 AAGTATTTTTTCCT SYNPCC7002_A1973
Thermosynechococcus elongatus BP-1
Position: -64
Score: 4.39733
Sequence: AGGTATATATTCTT
Locus tag: null
Name: ndhD
Funciton: NADH dehydrogenase subunit
ndhD -64 4.4 AGGTATATATTCTT null
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