Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing glnB gene

Properties
Regulog: NtrC - Shewanellaceae
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator
Biological process: Nitrogen assimilation
Effector: Phosphorylated NtrB, signal histidine kinase
Phylum: Proteobacteria/gamma
Built upon 94 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -172
Score: 5.63239
Sequence: TGCACCACCTTGGTGCG
Position: -142
Score: 4.74771
Sequence: TGCACTTTTTTTGTGCG
Locus tag: Sama_0650
Name: glnB
Funciton: nitrogen regulatory protein P-II 1
Locus tag: Sama_0651
Name: amtB
Funciton: ammonium transporter
glnB-amtB -172 5.6 TGCACCACCTTGGTGCG Sama_0650
-142 4.7 TGCACTTTTTTTGTGCG
Shewanella baltica OS155
Position: -144
Score: 5.06323
Sequence: TGCTCGATCATGGTGCA
Locus tag: Sbal_0797
Name: glnB
Funciton: nitrogen regulatory protein P-II 1
Locus tag: Sbal_0798
Name: amtB
Funciton: ammonium transporter
glnB-amtB -144 5.1 TGCTCGATCATGGTGCA Sbal_0797
Shewanella denitrificans OS217
Position: -195
Score: 5.15008
Sequence: TGCGCCACTTAGGTGCA
Position: -152
Score: 5.71823
Sequence: CGCACCTTATTGGTGCA
Locus tag: Sden_2905
Name: glnB
Funciton: nitrogen regulatory protein P-II 1
Locus tag: Sden_2904
Name: amtB
Funciton: ammonium transporter
glnB-amtB -195 5.2 TGCGCCACTTAGGTGCA Sden_2905
-152 5.7 CGCACCTTATTGGTGCA
Shewanella frigidimarina NCIMB 400
Position: -183
Score: 5.40632
Sequence: TGCACCAAAACGATGCA
Locus tag: Sfri_0623
Name: glnB
Funciton: nitrogen regulatory protein P-II 1
Locus tag: Sfri_0624
Name: amtB
Funciton: ammonium transporter
glnB-amtB -183 5.4 TGCACCAAAACGATGCA Sfri_0623
Shewanella halifaxensis HAW-EB4
Position: -137
Score: 4.69778
Sequence: CGCACTCGAATGGTGCA
Locus tag: Shal_0888
Name: glnB
Funciton: nitrogen regulatory protein P-II 1
Locus tag: Shal_0889
Name: amtB
Funciton: ammonium transporter
glnB-amtB -137 4.7 CGCACTCGAATGGTGCA Shal_0888
Shewanella loihica PV-4
Position: -172
Score: 4.52304
Sequence: TGCGCTATTTTTGTGCG
Position: -142
Score: 5.76699
Sequence: CGCACCTAATTGGTGCA
Locus tag: Shew_0846
Name: glnB
Funciton: nitrogen regulatory protein P-II 1
Locus tag: Shew_0847
Name: amtB
Funciton: ammonium transporter
glnB-amtB -172 4.5 TGCGCTATTTTTGTGCG Shew_0846
-142 5.8 CGCACCTAATTGGTGCA
Shewanella oneidensis MR-1
Position: -142
Score: 5.45331
Sequence: TGCACAATTCTGGTGCA
Locus tag: SO_0761
Name: glnB
Funciton: nitrogen regulatory protein P-II 1
Locus tag: SO_0760
Name: amtB
Funciton: ammonium transporter
glnB-amtB -142 5.5 TGCACAATTCTGGTGCA SO_0761
Shewanella pealeana ATCC 700345
Position: -135
Score: 5.47643
Sequence: TGCACCTTGCTGGTGCA
Locus tag: Spea_0833
Name: glnB
Funciton: nitrogen regulatory protein P-II 1
Locus tag: Spea_0834
Name: amtB
Funciton: ammonium transporter
glnB-amtB -135 5.5 TGCACCTTGCTGGTGCA Spea_0833
Shewanella piezotolerans WP3
Position: -136
Score: 5.4007
Sequence: TGCACCCGATTGGTGCA
Locus tag: swp_3956
Name: glnB
Funciton: nitrogen regulatory protein P-II 1
Locus tag: swp_3955
Name: amtB
Funciton: ammonium transporter
glnB-amtB -136 5.4 TGCACCCGATTGGTGCA swp_3956
Shewanella putrefaciens CN-32
Position: -143
Score: 5.50208
Sequence: TGCACAAATGTGGTGCA
Locus tag: Sputcn32_3241
Name: glnB
Funciton: nitrogen regulatory protein P-II 1
Locus tag: Sputcn32_3240
Name: amtB
Funciton: ammonium transporter
glnB-amtB -143 5.5 TGCACAAATGTGGTGCA Sputcn32_3241
Shewanella sediminis HAW-EB3
Position: -151
Score: 5.05711
Sequence: CGCACTTGTTTGGTGCA
Locus tag: Ssed_0933
Name: glnB
Funciton: nitrogen regulatory protein P-II 1
Locus tag: Ssed_0934
Name: amtB
Funciton: ammonium transporter
glnB-amtB -151 5.1 CGCACTTGTTTGGTGCA Ssed_0933
Shewanella sp ANA-3
Position: -143
Score: 5.21702
Sequence: TGCACAAGTCTGGTGCA
Locus tag: Shewana3_3532
Name: glnB
Funciton: nitrogen regulatory protein P-II 1
Locus tag: Shewana3_3531
Name: amtB
Funciton: ammonium transporter
glnB-amtB -143 5.2 TGCACAAGTCTGGTGCA Shewana3_3532
Shewanella sp MR-4
Position: -143
Score: 5.21702
Sequence: TGCACAAGTCTGGTGCA
Locus tag: Shewmr4_3362
Name: glnB
Funciton: nitrogen regulatory protein P-II 1
Locus tag: Shewmr4_3361
Name: amtB
Funciton: ammonium transporter
glnB-amtB -143 5.2 TGCACAAGTCTGGTGCA Shewmr4_3362
Shewanella sp MR-7
Position: -143
Score: 5.21702
Sequence: TGCACAAGTCTGGTGCA
Locus tag: Shewmr7_0591
Name: glnB
Funciton: nitrogen regulatory protein P-II 1
Locus tag: Shewmr7_0592
Name: amtB
Funciton: ammonium transporter
glnB-amtB -143 5.2 TGCACAAGTCTGGTGCA Shewmr7_0591
Shewanella sp W3-18-1
Position: -143
Score: 5.50208
Sequence: TGCACAAATGTGGTGCA
Locus tag: Sputw3181_0700
Name: glnB
Funciton: nitrogen regulatory protein P-II 1
Locus tag: Sputw3181_0701
Name: amtB
Funciton: ammonium transporter
glnB-amtB -143 5.5 TGCACAAATGTGGTGCA Sputw3181_0700
Shewanella woodyi ATCC 51908
Position: -173
Score: 4.61269
Sequence: TGCGCTAATTCCGTGCA
Position: -143
Score: 5.44014
Sequence: CGCACCTTAATGGTGCG
Locus tag: Swoo_0979
Name: glnB
Funciton: nitrogen regulatory protein P-II 1
Locus tag: Swoo_0980
Name: amtB
Funciton: ammonium transporter
glnB-amtB -173 4.6 TGCGCTAATTCCGTGCA Swoo_0979
-143 5.4 CGCACCTTAATGGTGCG
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