Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing glnA gene

Properties
Regulog: NtrC - Shewanellaceae
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator
Biological process: Nitrogen assimilation
Effector: Phosphorylated NtrB, signal histidine kinase
Phylum: Proteobacteria/gamma
Built upon 94 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -244
Score: 4.90552
Sequence: TGCACCTTTATCATGCA
Position: -214
Score: 5.09366
Sequence: CGCACCAACATTGTGCG
Position: -192
Score: 5.46235
Sequence: TGCCCCGATTTGGTGCA
Locus tag: Sama_3416
Name: glnA
Funciton: glutamine synthetase, type I
glnA -244 4.9 TGCACCTTTATCATGCA Sama_3416
-214 5.1 CGCACCAACATTGTGCG
-192 5.5 TGCCCCGATTTGGTGCA
Shewanella baltica OS155
Position: -183
Score: 5.47027
Sequence: AGCACCATAGTGGTGCA
Locus tag: Sbal_0306
Name: glnA
Funciton: glutamine synthetase, type I
glnA -183 5.5 AGCACCATAGTGGTGCA Sbal_0306
Shewanella denitrificans OS217
Position: -251
Score: 5.69668
Sequence: TGCACCATAACGGTGCG
Position: -228
Score: 5.01626
Sequence: TGCACCATTATGGTGAT
Locus tag: Sden_3454
Name: glnA
Funciton: glutamine synthetase, type I
glnA -251 5.7 TGCACCATAACGGTGCG Sden_3454
-228 5 TGCACCATTATGGTGAT
Shewanella frigidimarina NCIMB 400
Position: -197
Score: 5.43688
Sequence: TGCACGAGGTTGGTGCA
Locus tag: Sfri_0325
Name: glnA
Funciton: glutamine synthetase, type I
glnA -197 5.4 TGCACGAGGTTGGTGCA Sfri_0325
Shewanella halifaxensis HAW-EB4
Position: -180
Score: 5.40059
Sequence: CGCACCAAAATAGTGCG
Locus tag: Shal_0353
Name: glnA
Funciton: glutamine synthetase, type I
glnA -180 5.4 CGCACCAAAATAGTGCG Shal_0353
Shewanella loihica PV-4
Position: -217
Score: 5.36444
Sequence: CGCACCATATTGGTGAA
Position: -178
Score: 5.89879
Sequence: TGCACCTTTATGGTGCA
Locus tag: Shew_3554
Name: glnA
Funciton: glutamine synthetase, type I
glnA -217 5.4 CGCACCATATTGGTGAA Shew_3554
-178 5.9 TGCACCTTTATGGTGCA
Shewanella oneidensis MR-1
Position: -246
Score: 4.60776
Sequence: TGCACTAAAATGGGGGA
Position: -179
Score: 5.36387
Sequence: TGCACCAACACAGTGCA
Locus tag: SO_4410
Name: glnA
Funciton: glutamine synthetase, type I
glnA -246 4.6 TGCACTAAAATGGGGGA SO_4410
-179 5.4 TGCACCAACACAGTGCA
Shewanella pealeana ATCC 700345
Position: -202
Score: 4.68881
Sequence: TGCACCATATAGATCCA
Position: -180
Score: 5.82542
Sequence: CGCACCAAAATGGTGCG
Locus tag: Spea_3916
Name: glnA
Funciton: glutamine synthetase, type I
glnA -202 4.7 TGCACCATATAGATCCA Spea_3916
-180 5.8 CGCACCAAAATGGTGCG
Shewanella piezotolerans WP3
Position: -218
Score: 4.68085
Sequence: TGCACGATTATGAAGCA
Position: -201
Score: 4.796
Sequence: CGCACCAAAATGATCCA
Position: -179
Score: 4.93408
Sequence: CGCACCATTAGAGTGCA
Locus tag: swp_0268
Name: glnA
Funciton: glutamine synthetase, type I
glnA -218 4.7 TGCACGATTATGAAGCA swp_0268
-201 4.8 CGCACCAAAATGATCCA
-179 4.9 CGCACCATTAGAGTGCA
Shewanella putrefaciens CN-32
Position: -184
Score: 5.39509
Sequence: CGCACCATCATAGTGCA
Locus tag: Sputcn32_0412
Name: glnA
Funciton: glutamine synthetase, type I
glnA -184 5.4 CGCACCATCATAGTGCA Sputcn32_0412
Shewanella sediminis HAW-EB3
Position: -227
Score: 4.71276
Sequence: CGCACCAGCTTGGTGAG
Position: -188
Score: 5.49262
Sequence: CGCACCAACTTAGTGCA
Locus tag: Ssed_0292
Name: glnA
Funciton: glutamine synthetase, type I
glnA -227 4.7 CGCACCAGCTTGGTGAG Ssed_0292
-188 5.5 CGCACCAACTTAGTGCA
Shewanella sp ANA-3
Position: -247
Score: 4.6402
Sequence: TGCACTAAAATGGTGTT
Position: -180
Score: 5.62991
Sequence: CGCACCAATATAGTGCA
Locus tag: Shewana3_0300
Name: glnA
Funciton: glutamine synthetase, type I
glnA -247 4.6 TGCACTAAAATGGTGTT Shewana3_0300
-180 5.6 CGCACCAATATAGTGCA
Shewanella sp MR-4
Position: -247
Score: 4.6402
Sequence: TGCACTAAAATGGTGTT
Position: -180
Score: 5.75533
Sequence: AGCACCAATATGGTGCA
Locus tag: Shewmr4_0305
Name: glnA
Funciton: glutamine synthetase, type I
glnA -247 4.6 TGCACTAAAATGGTGTT Shewmr4_0305
-180 5.8 AGCACCAATATGGTGCA
Shewanella sp MR-7
Position: -183
Score: 5.56927
Sequence: AGCACCAACATGGTGCA
Locus tag: Shewmr7_3719
Name: glnA
Funciton: glutamine synthetase, type I
glnA -183 5.6 AGCACCAACATGGTGCA Shewmr7_3719
Shewanella sp W3-18-1
Position: -184
Score: 5.58115
Sequence: CGCACCATTATAGTGCA
Locus tag: Sputw3181_0266
Name: glnA
Funciton: glutamine synthetase, type I
glnA -184 5.6 CGCACCATTATAGTGCA Sputw3181_0266
Shewanella woodyi ATCC 51908
Position: -216
Score: 4.664
Sequence: CGCACCAGGATGGTGAG
Position: -199
Score: 5.01997
Sequence: CGCACCATTATCGGGCA
Position: -177
Score: 5.39362
Sequence: CGCACCAAACTAGTGCA
Locus tag: Swoo_4643
Name: glnA
Funciton: glutamine synthetase, type I
glnA -216 4.7 CGCACCAGGATGGTGAG Swoo_4643
-199 5 CGCACCATTATCGGGCA
-177 5.4 CGCACCAAACTAGTGCA
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