Orthologous regulated operons containing ntrC gene
| Regulog: | NtrC - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | Fis |
| Regulation mode: | activator |
| Biological process: | Nitrogen assimilation |
| Effector: | Phosphorylated NtrB, signal histidine kinase |
| Phylum: | Proteobacteria/gamma |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Shewanella amazonensis SB2B | ||||
|
Position: -51
Score: 6.28406 Sequence: TGCACCATATTGGTGCA
Position: -38
Score: 6.28406 Sequence: TGCACCATATTGGTGCA
Locus tag: Sama_3426
Name: ntrB Funciton: nitrogen regulation protein
Locus tag: Sama_3427
Name: ntrC Funciton: nitrogen regulation protein NR(I) |
||||
| ntrB-ntrC | -51 | 6.3 | TGCACCATATTGGTGCA | Sama_3426 |
| -38 | 6.3 | TGCACCATATTGGTGCA | ||
| Shewanella baltica OS155 | ||||
|
Position: -52
Score: 5.48659 Sequence: TGCACCAGATTGGCGCA
Position: -39
Score: 5.76968 Sequence: CGCACCATAGTGGTGCA
Locus tag: Sbal_0267
Name: ntrB Funciton: nitrogen regulation protein
Locus tag: Sbal_0266
Name: ntrC Funciton: nitrogen regulation protein NR(I) |
||||
| ntrB-ntrC | -52 | 5.5 | TGCACCAGATTGGCGCA | Sbal_0267 |
| -39 | 5.8 | CGCACCATAGTGGTGCA | ||
| Shewanella denitrificans OS217 | ||||
|
Position: -79
Score: 5.99901 Sequence: TGCACCATAGTGGTGCA
Position: -52
Score: 5.76968 Sequence: TGCACCACAATGGTGCG
Locus tag: Sden_3457
Name: ntrB Funciton: nitrogen regulation protein
Locus tag: Sden_3458
Name: ntrC Funciton: nitrogen regulation protein NR(I) |
||||
| ntrB-ntrC | -79 | 6 | TGCACCATAGTGGTGCA | Sden_3457 |
| -52 | 5.8 | TGCACCACAATGGTGCG | ||
| Shewanella frigidimarina NCIMB 400 | ||||
|
Position: -50
Score: 6.10351 Sequence: CGCACCAAATTGGTGCA
Position: -37
Score: 5.66686 Sequence: TGCATCATAATGGTGCA
Locus tag: Sfri_0321
Name: ntrB Funciton: nitrogen regulation protein
Locus tag: Sfri_0320
Name: ntrC Funciton: nitrogen regulation protein NR(I) |
||||
| ntrB-ntrC | -50 | 6.1 | CGCACCAAATTGGTGCA | Sfri_0321 |
| -37 | 5.7 | TGCATCATAATGGTGCA | ||
| Shewanella halifaxensis HAW-EB4 | ||||
|
Position: -79
Score: 6.04777 Sequence: TGCACCACTTTGGTGCA
Position: -66
Score: 5.76968 Sequence: TGCACCATAGTGGTGCG
Locus tag: Shal_0342
Name: ntrB Funciton: nitrogen regulation protein
Locus tag: Shal_0341
Name: ntrC Funciton: nitrogen regulation protein NR(I) |
||||
| ntrB-ntrC | -79 | 6 | TGCACCACTTTGGTGCA | Shal_0342 |
| -66 | 5.8 | TGCACCATAGTGGTGCG | ||
| Shewanella loihica PV-4 | ||||
|
Position: -52
Score: 6.33283 Sequence: TGCACCAAATTGGTGCA
Position: -39
Score: 6.2353 Sequence: TGCACCATTATGGTGCA
Locus tag: Shew_3560
Name: ntrB Funciton: nitrogen regulation protein
Locus tag: Shew_3561
Name: ntrC Funciton: nitrogen regulation protein NR(I) |
||||
| ntrB-ntrC | -52 | 6.3 | TGCACCAAATTGGTGCA | Shew_3560 |
| -39 | 6.2 | TGCACCATTATGGTGCA | ||
| Shewanella oneidensis MR-1 | ||||
|
Position: -52
Score: 6.02353 Sequence: TGCACCAAATCGGTGCA
Position: -39
Score: 4.90145 Sequence: TGCAACATAAGGGTGCA
Locus tag: SO_4471
Name: ntrB Funciton: nitrogen regulation protein
Locus tag: SO_4472
Name: ntrC Funciton: nitrogen regulation protein NR(I) |
||||
| ntrB-ntrC | -52 | 6 | TGCACCAAATCGGTGCA | SO_4471 |
| -39 | 4.9 | TGCAACATAAGGGTGCA | ||
| Shewanella pealeana ATCC 700345 | ||||
|
Position: -79
Score: 5.97476 Sequence: TGCACCATTTCGGTGCA
Locus tag: Spea_3929
Name: ntrB Funciton: nitrogen regulation protein
Locus tag: Spea_3930
Name: ntrC Funciton: nitrogen regulation protein NR(I) |
||||
| ntrB-ntrC | -79 | 6 | TGCACCATTTCGGTGCA | Spea_3929 |
| Shewanella piezotolerans WP3 | ||||
|
Position: -79
Score: 6.05474 Sequence: CGCACCATTTTGGTGCA
Position: -66
Score: 5.99901 Sequence: TGCACCATAGTGGTGCA
Position: -39
Score: 4.80326 Sequence: CGTTCCAAAATGGTGCA
Locus tag: swp_0250
Name: ntrB Funciton: nitrogen regulation protein
Locus tag: swp_0249
Name: ntrC Funciton: nitrogen regulation protein NR(I) |
||||
| ntrB-ntrC | -79 | 6.1 | CGCACCATTTTGGTGCA | swp_0250 |
| -66 | 6 | TGCACCATAGTGGTGCA | ||
| -39 | 4.8 | CGTTCCAAAATGGTGCA | ||
| Shewanella putrefaciens CN-32 | ||||
|
Position: -52
Score: 6.02353 Sequence: TGCACCAAATCGGTGCA
Position: -39
Score: 4.96112 Sequence: TGCATCATGTTGATGCA
Locus tag: Sputcn32_0372
Name: ntrB Funciton: nitrogen regulation protein
Locus tag: Sputcn32_0371
Name: ntrC Funciton: nitrogen regulation protein NR(I) |
||||
| ntrB-ntrC | -52 | 6 | TGCACCAAATCGGTGCA | Sputcn32_0372 |
| -39 | 5 | TGCATCATGTTGATGCA | ||
| Shewanella sediminis HAW-EB3 | ||||
|
Position: -51
Score: 6.33283 Sequence: TGCACCAATTTGGTGCA
Position: -38
Score: 6.04924 Sequence: TGCACCATGATGGTGCA
Locus tag: Ssed_0283
Name: ntrB Funciton: nitrogen regulation protein
Locus tag: Ssed_0282
Name: ntrC Funciton: nitrogen regulation protein NR(I) |
||||
| ntrB-ntrC | -51 | 6.3 | TGCACCAATTTGGTGCA | Ssed_0283 |
| -38 | 6 | TGCACCATGATGGTGCA | ||
| Shewanella sp ANA-3 | ||||
|
Position: -52
Score: 6.02353 Sequence: TGCACCAAATCGGTGCA
Position: -39
Score: 5.54852 Sequence: TGCAACATAATGGTGCA
Locus tag: Shewana3_0259
Name: ntrB Funciton: nitrogen regulation protein
Locus tag: Shewana3_0258
Name: ntrC Funciton: nitrogen regulation protein NR(I) |
||||
| ntrB-ntrC | -52 | 6 | TGCACCAAATCGGTGCA | Shewana3_0259 |
| -39 | 5.5 | TGCAACATAATGGTGCA | ||
| Shewanella sp MR-4 | ||||
|
Position: -52
Score: 6.02353 Sequence: TGCACCAAATCGGTGCA
Position: -39
Score: 5.54852 Sequence: TGCAACATAATGGTGCA
Locus tag: Shewmr4_0258
Name: ntrB Funciton: nitrogen regulation protein
Locus tag: Shewmr4_0257
Name: ntrC Funciton: nitrogen regulation protein NR(I) |
||||
| ntrB-ntrC | -52 | 6 | TGCACCAAATCGGTGCA | Shewmr4_0258 |
| -39 | 5.5 | TGCAACATAATGGTGCA | ||
| Shewanella sp MR-7 | ||||
|
Position: -52
Score: 6.02353 Sequence: TGCACCAAATCGGTGCA
Position: -39
Score: 5.54852 Sequence: TGCAACATAATGGTGCA
Locus tag: Shewmr7_3763
Name: ntrB Funciton: nitrogen regulation protein
Locus tag: Shewmr7_3764
Name: ntrC Funciton: nitrogen regulation protein NR(I) |
||||
| ntrB-ntrC | -52 | 6 | TGCACCAAATCGGTGCA | Shewmr7_3763 |
| -39 | 5.5 | TGCAACATAATGGTGCA | ||
| Shewanella sp W3-18-1 | ||||
|
Position: -52
Score: 6.02353 Sequence: TGCACCAAATCGGTGCA
Position: -39
Score: 4.96112 Sequence: TGCATCATGTTGATGCA
Locus tag: Sputw3181_0222
Name: ntrB Funciton: nitrogen regulation protein
Locus tag: Sputw3181_0221
Name: ntrC Funciton: nitrogen regulation protein NR(I) |
||||
| ntrB-ntrC | -52 | 6 | TGCACCAAATCGGTGCA | Sputw3181_0222 |
| -39 | 5 | TGCATCATGTTGATGCA | ||
| Shewanella woodyi ATCC 51908 | ||||
|
Position: -51
Score: 5.62294 Sequence: TGCACTAGTTTGGTGCA
Position: -38
Score: 6.2353 Sequence: TGCACCATAATGGTGCA
Locus tag: Swoo_4650
Name: ntrB Funciton: nitrogen regulation protein
Locus tag: Swoo_4651
Name: ntrC Funciton: nitrogen regulation protein NR(I) |
||||
| ntrB-ntrC | -51 | 5.6 | TGCACTAGTTTGGTGCA | Swoo_4650 |
| -38 | 6.2 | TGCACCATAATGGTGCA | ||