Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ldh gene

Properties
Regulog: LiuR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: repressor
Biological process: Branched-chain amino acid degradation
Effector:
Phylum: Proteobacteria/gamma
Built upon 134 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -164
Score: 6.04324
Sequence: CTTTACGTTGACGTAAAG
Locus tag: Sama_2067
Name: ldh
Funciton: leucine dehydrogenase
ldh -164 6 CTTTACGTTGACGTAAAG Sama_2067
Shewanella baltica OS155
Position: -151
Score: 5.98146
Sequence: GCTTACGTTTACGTAAAG
Locus tag: Sbal_2483
Name: ldh
Funciton: leucine dehydrogenase
ldh -151 6 GCTTACGTTTACGTAAAG Sbal_2483
Shewanella denitrificans OS217
Position: -157
Score: 6.36003
Sequence: CTTTACGTTTACGTAAAG
Locus tag: Sden_1823
Name: ldh
Funciton: leucine dehydrogenase
ldh -157 6.4 CTTTACGTTTACGTAAAG Sden_1823
Shewanella frigidimarina NCIMB 400
Position: -195
Score: 6.36003
Sequence: CTTTACGTTTACGTAAAG
Locus tag: Sfri_2265
Name: ldh
Funciton: leucine dehydrogenase
ldh -195 6.4 CTTTACGTTTACGTAAAG Sfri_2265
Shewanella halifaxensis HAW-EB4
Position: -174
Score: 6.53232
Sequence: CTTTACGTTAACGTAAAG
Locus tag: Shal_1711
Name: ldh
Funciton: leucine dehydrogenase
ldh -174 6.5 CTTTACGTTAACGTAAAG Shal_1711
Shewanella loihica PV-4
Position: -174
Score: 6.53232
Sequence: CTTTACGTTAACGTAAAG
Locus tag: Shew_1555
Name: ldh
Funciton: leucine dehydrogenase
ldh -174 6.5 CTTTACGTTAACGTAAAG Shew_1555
Shewanella oneidensis MR-1
Position: -171
Score: 6.00177
Sequence: CCTTACGTTTACGTAAAG
Locus tag: SO_2638
Name: ldh
Funciton: leucine dehydrogenase
ldh -171 6 CCTTACGTTTACGTAAAG SO_2638
Shewanella pealeana ATCC 700345
Position: -174
Score: 6.53232
Sequence: CTTTACGTTAACGTAAAG
Locus tag: Spea_2543
Name: ldh
Funciton: leucine dehydrogenase
ldh -174 6.5 CTTTACGTTAACGTAAAG Spea_2543
Shewanella piezotolerans WP3
Position: -175
Score: 6.53232
Sequence: CTTTACGTTAACGTAAAG
Locus tag: swp_1857
Name: ldh
Funciton: leucine dehydrogenase
ldh -175 6.5 CTTTACGTTAACGTAAAG swp_1857
Shewanella putrefaciens CN-32
Position: -172
Score: 5.98146
Sequence: GCTTACGTTTACGTAAAG
Locus tag: Sputcn32_2238
Name: ldh
Funciton: leucine dehydrogenase
ldh -172 6 GCTTACGTTTACGTAAAG Sputcn32_2238
Shewanella sediminis HAW-EB3
Position: -173
Score: 6.53232
Sequence: CTTTACGTTAACGTAAAG
Locus tag: Ssed_1877
Name: ldh
Funciton: leucine dehydrogenase
ldh -173 6.5 CTTTACGTTAACGTAAAG Ssed_1877
Shewanella sp ANA-3
Position: -171
Score: 6.00177
Sequence: CCTTACGTTTACGTAAAG
Locus tag: Shewana3_1742
Name: ldh
Funciton: leucine dehydrogenase
ldh -171 6 CCTTACGTTTACGTAAAG Shewana3_1742
Shewanella sp MR-4
Position: -171
Score: 6.00177
Sequence: CCTTACGTTTACGTAAAG
Locus tag: Shewmr4_1598
Name: ldh
Funciton: leucine dehydrogenase
ldh -171 6 CCTTACGTTTACGTAAAG Shewmr4_1598
Shewanella sp MR-7
Position: -171
Score: 6.00177
Sequence: CCTTACGTTTACGTAAAG
Locus tag: Shewmr7_1673
Name: ldh
Funciton: leucine dehydrogenase
ldh -171 6 CCTTACGTTTACGTAAAG Shewmr7_1673
Shewanella sp W3-18-1
Position: -172
Score: 5.98146
Sequence: GCTTACGTTTACGTAAAG
Locus tag: Sputw3181_1771
Name: ldh
Funciton: leucine dehydrogenase
ldh -172 6 GCTTACGTTTACGTAAAG Sputw3181_1771
Shewanella woodyi ATCC 51908
Position: -174
Score: 5.7845
Sequence: ATTGACGTTAACGTAAAG
Locus tag: Swoo_2710
Name: ldh
Funciton: leucine dehydrogenase
ldh -174 5.8 ATTGACGTTAACGTAAAG Swoo_2710
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