Orthologous regulated operons containing cmpD gene

Properties
Regulog:	CcmR - Cyanobacteria
Regulator type:	Transcription factor
Regulator family:	LysR
Regulation mode:	repressor
Biological process:	Carbon dioxide fixation
Effector:
Phylum:	Cyanobacteria

Built upon 72 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Cyanothece sp. ATCC 51142
Position: -299 Score: 4.8752 Sequence: ATAGATAAATACCTAT Locus tag: cce_0305 Name: cmpA Funciton: Bicarbontate ABC transporter, substrate-binding protein Locus tag: cce_0304 Name: cmpB Funciton: Bicarbontate ABC transporter, permease protein Locus tag: cce_0303 Name: cmpC Funciton: Bicarbontate ABC transporter, ATP-binding protein 1 Locus tag: cce_0302 Name: cmpD Funciton: Bicarbontate ABC transporter, ATP-binding protein 2
cmpA-cmpB-cmpC-cmpD	-299	4.9	ATAGATAAATACCTAT	cce_0305
Cyanothece sp. PCC 7425
Position: -286 Score: 5.15647 Sequence: ATAGACTTAGGGCTAT Locus tag: Cyan7425_4925 Name: cmpA Funciton: Bicarbontate ABC transporter, substrate-binding protein Locus tag: Cyan7425_4924 Name: cmpB Funciton: Bicarbontate ABC transporter, permease protein Locus tag: Cyan7425_4923 Name: cmpC Funciton: Bicarbontate ABC transporter, ATP-binding protein 1 Locus tag: Cyan7425_4922 Name: cmpD Funciton: Bicarbontate ABC transporter, ATP-binding protein 2 Locus tag: Cyan7425_4921 Name: cce_1687 Funciton: Predicted membrane protein (COG3431)
cmpA-cmpB-cmpC-cmpD-cce_1687	-286	5.2	ATAGACTTAGGGCTAT	Cyan7425_4925
Cyanothece sp. PCC 8801
Position: -268 Score: 4.49863 Sequence: ATACATATTAAGCTAT Locus tag: PCC8801_3521 Name: cmpA Funciton: Bicarbontate ABC transporter, substrate-binding protein Locus tag: PCC8801_3520 Name: cmpB Funciton: Bicarbontate ABC transporter, permease protein Locus tag: PCC8801_3519 Name: cmpC Funciton: Bicarbontate ABC transporter, ATP-binding protein 1 Locus tag: PCC8801_3518 Name: cmpD Funciton: Bicarbontate ABC transporter, ATP-binding protein 2
cmpA-cmpB-cmpC-cmpD	-268	4.5	ATACATATTAAGCTAT	PCC8801_3521
Gloeobacter violaceus PCC 7421
Position: -168 Score: 5.58602 Sequence: ATAGATTAATATCTAT Position: -136 Score: 5.0229 Sequence: ATCGACTTTTCTCTAT Locus tag: gvip279 Name: cmpA Funciton: Bicarbontate ABC transporter, substrate-binding protein Locus tag: gvip280 Name: cmpB Funciton: Bicarbontate ABC transporter, permease protein Locus tag: gvip281 Name: ecaB Funciton: Periplasmic carbonic anhydrase Locus tag: gvip282 Name: cmpC Funciton: Bicarbontate ABC transporter, ATP-binding protein 1 Locus tag: gvip283 Name: cmpD Funciton: Bicarbontate ABC transporter, ATP-binding protein 2
cmpA-cmpB-ecaB-cmpC-cmpD	-168	5.6	ATAGATTAATATCTAT	gvip279
	-136	5	ATCGACTTTTCTCTAT
Microcystis aeruginosa NIES-843
Position: -104 Score: 4.6449 Sequence: ATAGCTAAATTTCTAT Locus tag: MAE_19990 Name: cmpA Funciton: Bicarbontate ABC transporter, substrate-binding protein Locus tag: MAE_20000 Name: cmpB Funciton: Bicarbontate ABC transporter, permease protein Locus tag: MAE_20010 Name: cmpC Funciton: Bicarbontate ABC transporter, ATP-binding protein 1 Locus tag: MAE_20020 Name: cmpD Funciton: Bicarbontate ABC transporter, ATP-binding protein 2
cmpA-cmpB-cmpC-cmpD	-104	4.6	ATAGCTAAATTTCTAT	MAE_19990
Synechococcus elongatus PCC 7942
Position: -186 Score: 4.85582 Sequence: ATTGACTTAGCTCTAT Locus tag: Synpcc7942_1488 Name: cmpA Funciton: Bicarbontate ABC transporter, substrate-binding protein Locus tag: Synpcc7942_1489 Name: cmpB Funciton: Bicarbontate ABC transporter, permease protein Locus tag: Synpcc7942_1490 Name: cmpC Funciton: Bicarbontate ABC transporter, ATP-binding protein 1 Locus tag: Synpcc7942_1491 Name: cmpD Funciton: Bicarbontate ABC transporter, ATP-binding protein 2
cmpA-cmpB-cmpC-cmpD	-186	4.9	ATTGACTTAGCTCTAT	Synpcc7942_1488
Synechocystis sp. PCC 6803
Position: -208 Score: 4.54532 Sequence: TTGGATATTTATCTAT Locus tag: slr0040 Name: cmpA Funciton: Bicarbontate ABC transporter, substrate-binding protein Locus tag: slr0041 Name: cmpB Funciton: Bicarbontate ABC transporter, permease protein Locus tag: slr0042 Name: porB Funciton: Low-CO2 inducible, outer membrane bicarbonate porin Locus tag: slr0043 Name: cmpC Funciton: Bicarbontate ABC transporter, ATP-binding protein 1 Locus tag: slr0044 Name: cmpD Funciton: Bicarbontate ABC transporter, ATP-binding protein 2
cmpA-cmpB-porB-cmpC-cmpD	-208	4.5	TTGGATATTTATCTAT	slr0040
Thermosynechococcus elongatus BP-1
Position: -124 Score: 4.05052 Sequence: ATAGATTGTTTGCAAT Locus tag: null Name: cmpA Funciton: Bicarbontate ABC transporter, substrate-binding protein Locus tag: null Name: cmpB Funciton: Bicarbontate ABC transporter, permease protein Locus tag: null Name: cmpC Funciton: Bicarbontate ABC transporter, ATP-binding protein 1 Locus tag: null Name: cmpD Funciton: Bicarbontate ABC transporter, ATP-binding protein 2
cmpA-cmpB-cmpC-cmpD	-124	4.1	ATAGATTGTTTGCAAT	null

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Orthologous regulated operons containing cmpD gene

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --