Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing sbtB gene

Properties
Regulog: CcmR - Cyanobacteria
Regulator type: Transcription factor
Regulator family: LysR
Regulation mode: repressor
Biological process: Carbon dioxide fixation
Effector:
Phylum: Cyanobacteria
Built upon 72 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Cyanothece sp. ATCC 51142
Position: -52
Score: 4.54216
Sequence: ATAGATTTTTGTCTTA
Locus tag: cce_2937
Name: sbtB
Funciton: Predicted membrane protein
sbtB -52 4.5 ATAGATTTTTGTCTTA cce_2937
Cyanothece sp. PCC 7425
Position: -94
Score: 4.22612
Sequence: TTTTACCTATGTCTAT
Locus tag: Cyan7425_5063
Name: sbtA
Funciton: High-affinity, low-flux sodium dependent bicarbonate transporter
Locus tag: Cyan7425_5062
Name: sbtB
Funciton: Predicted membrane protein
sbtA-sbtB -94 4.2 TTTTACCTATGTCTAT Cyan7425_5063
Cyanothece sp. PCC 8801
Position: -174
Score: 5.44315
Sequence: ATAGATAAATGTCTAT
Locus tag: PCC8801_1249
Name: sbtA
Funciton: High-affinity, low-flux sodium dependent bicarbonate transporter
Locus tag: PCC8801_1248
Name: sbtB
Funciton: Predicted membrane protein
sbtA-sbtB -174 5.4 ATAGATAAATGTCTAT PCC8801_1249
Microcystis aeruginosa NIES-843
Position: -196
Score: 4.6565
Sequence: ATAGGTTTAAATCAAT
Position: -111
Score: 4.917
Sequence: ATAGATTTATAACAAT
Position: -80
Score: 5.01353
Sequence: ATAAAGTTTTGTCTAT
Locus tag: MAE_62080
Name: Synpcc7942_2328
Funciton: Predicted permease
Locus tag: MAE_62090
Name: sbtA
Funciton: High-affinity, low-flux sodium dependent bicarbonate transporter
Locus tag: MAE_62100
Name: sbtB
Funciton: Predicted membrane protein
Locus tag: MAE_62110
Name: nhaS
Funciton: Predicted sodium/hydrogen exchanger
Synpcc7942_2328-sbtA-sbtB-nhaS -196 4.7 ATAGGTTTAAATCAAT MAE_62080
-111 4.9 ATAGATTTATAACAAT
-80 5 ATAAAGTTTTGTCTAT
Nostoc sp. PCC 7120
Position: -191
Score: 4.58621
Sequence: ATAGAATTTTGGCTCT
Position: -173
Score: 4.78035
Sequence: ATAAATATTGATCTAT
Locus tag: all2134
Name: sbtA
Funciton: High-affinity, low-flux sodium dependent bicarbonate transporter
Locus tag: all2133
Name: sbtB
Funciton: Predicted membrane protein
sbtA-sbtB -191 4.6 ATAGAATTTTGGCTCT all2134
-173 4.8 ATAAATATTGATCTAT
Synechococcus sp. PCC 7002
Position: -131
Score: 4.5769
Sequence: ATAGACTTAAAGATAT
Position: -99
Score: 4.22255
Sequence: ATAGAGTCTTGTCTTT
Locus tag: SYNPCC7002_A0472
Name: sbtB
Funciton: Predicted membrane protein
sbtB -131 4.6 ATAGACTTAAAGATAT SYNPCC7002_A0472
-99 4.2 ATAGAGTCTTGTCTTT
Synechocystis sp. PCC 6803
Position: -182
Score: 4.66804
Sequence: ATAGACTTTAGCTTAT
Position: -136
Score: 5.03171
Sequence: ATAGACAAGAGTCTAT
Locus tag: slr1512
Name: sbtA
Funciton: High-affinity, low-flux sodium dependent bicarbonate transporter
Locus tag: slr1513
Name: sbtB
Funciton: Predicted membrane protein
sbtA-sbtB -182 4.7 ATAGACTTTAGCTTAT slr1512
-136 5 ATAGACAAGAGTCTAT
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