Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing sbtA gene

Properties
Regulog: CcmR - Cyanobacteria
Regulator type: Transcription factor
Regulator family: LysR
Regulation mode: repressor
Biological process: Carbon dioxide fixation
Effector:
Phylum: Cyanobacteria
Built upon 72 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Cyanothece sp. ATCC 51142
Position: -181
Score: 4.03161
Sequence: ATAGATCGATATATAT
Locus tag: cce_2939
Name: sbtA
Funciton: High-affinity, low-flux sodium dependent bicarbonate transporter
sbtA -181 4 ATAGATCGATATATAT cce_2939
Cyanothece sp. PCC 7425
Position: -94
Score: 4.22612
Sequence: TTTTACCTATGTCTAT
Locus tag: Cyan7425_5063
Name: sbtA
Funciton: High-affinity, low-flux sodium dependent bicarbonate transporter
Locus tag: Cyan7425_5062
Name: sbtB
Funciton: Predicted membrane protein
sbtA-sbtB -94 4.2 TTTTACCTATGTCTAT Cyan7425_5063
Cyanothece sp. PCC 8801
Position: -174
Score: 5.44315
Sequence: ATAGATAAATGTCTAT
Locus tag: PCC8801_1249
Name: sbtA
Funciton: High-affinity, low-flux sodium dependent bicarbonate transporter
Locus tag: PCC8801_1248
Name: sbtB
Funciton: Predicted membrane protein
sbtA-sbtB -174 5.4 ATAGATAAATGTCTAT PCC8801_1249
Microcystis aeruginosa NIES-843
Position: -196
Score: 4.6565
Sequence: ATAGGTTTAAATCAAT
Position: -111
Score: 4.917
Sequence: ATAGATTTATAACAAT
Position: -80
Score: 5.01353
Sequence: ATAAAGTTTTGTCTAT
Locus tag: MAE_62080
Name: Synpcc7942_2328
Funciton: Predicted permease
Locus tag: MAE_62090
Name: sbtA
Funciton: High-affinity, low-flux sodium dependent bicarbonate transporter
Locus tag: MAE_62100
Name: sbtB
Funciton: Predicted membrane protein
Locus tag: MAE_62110
Name: nhaS
Funciton: Predicted sodium/hydrogen exchanger
Synpcc7942_2328-sbtA-sbtB-nhaS -196 4.7 ATAGGTTTAAATCAAT MAE_62080
-111 4.9 ATAGATTTATAACAAT
-80 5 ATAAAGTTTTGTCTAT
Nostoc sp. PCC 7120
Position: -191
Score: 4.58621
Sequence: ATAGAATTTTGGCTCT
Position: -173
Score: 4.78035
Sequence: ATAAATATTGATCTAT
Locus tag: all2134
Name: sbtA
Funciton: High-affinity, low-flux sodium dependent bicarbonate transporter
Locus tag: all2133
Name: sbtB
Funciton: Predicted membrane protein
sbtA-sbtB -191 4.6 ATAGAATTTTGGCTCT all2134
-173 4.8 ATAAATATTGATCTAT
Synechococcus elongatus PCC 7942
Position: -207
Score: 4.60931
Sequence: ATAGACAGGAATCTAT
Locus tag: Synpcc7942_1475
Name: sbtA
Funciton: High-affinity, low-flux sodium dependent bicarbonate transporter
sbtA -207 4.6 ATAGACAGGAATCTAT Synpcc7942_1475
Synechococcus sp. PCC 7002
Position: -134
Score: 4.9125
Sequence: ATAGAGCTAAATCTAT
Locus tag: SYNPCC7002_A0470
Name: sbtA
Funciton: High-affinity, low-flux sodium dependent bicarbonate transporter
sbtA -134 4.9 ATAGAGCTAAATCTAT SYNPCC7002_A0470
Synechocystis sp. PCC 6803
Position: -182
Score: 4.66804
Sequence: ATAGACTTTAGCTTAT
Position: -136
Score: 5.03171
Sequence: ATAGACAAGAGTCTAT
Locus tag: slr1512
Name: sbtA
Funciton: High-affinity, low-flux sodium dependent bicarbonate transporter
Locus tag: slr1513
Name: sbtB
Funciton: Predicted membrane protein
sbtA-sbtB -182 4.7 ATAGACTTTAGCTTAT slr1512
-136 5 ATAGACAAGAGTCTAT
© 2009-2020 RegPrecise