Orthologous regulated operons containing ribD gene
Regulog: | RbkR - Thermococcales |
Regulator type: | Transcription factor |
Regulator family: | [Other] |
Regulation mode: | |
Biological process: | Riboflavin biosynthesis |
Effector: | Flavin mononucleotide |
Phylum: | Euryarchaeota |
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Operon | Position | Score | Sequence | Locus Tag of the First Gene |
---|---|---|---|---|
Pyrococcus furiosus DSM 3638 | ||||
Position: -56
Score: 4.92515 Sequence: CTGTCTTATTTTTGGAACAC
Position: -23
Score: 4.56364 Sequence: TAGTTCTATACTTGAGACAT
Locus tag: PF0064
Name: ribBA Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: PF0063
Name: ribH Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
Locus tag: PF0062
Name: ribD Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: PF0061
Name: ribE Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9) |
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ribBA-ribH-ribD-ribE | -56 | 4.9 | CTGTCTTATTTTTGGAACAC | PF0064 |
-23 | 4.6 | TAGTTCTATACTTGAGACAT | ||
Thermococcus gammatolerans EJ3 | ||||
Position: 92
Score: 6.00711 Sequence: ATGTTCCAAAAACGGAACAA
Locus tag: TGAM_1254
Name: ribD Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: TGAM_1255
Name: ribE Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
Locus tag: TGAM_1256
Name: ribBA Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: TGAM_1257
Name: ribH Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
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ribD-ribE-ribBA-ribH | 92 | 6 | ATGTTCCAAAAACGGAACAA | TGAM_1254 |
Thermococcus kodakaraensis KOD1 | ||||
Position: -52
Score: 5.98256 Sequence: TTGTTCCAACCTTGGAACAA
Locus tag: TK0424
Name: ribD Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: TK0425
Name: ribE Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9) |
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ribD-ribE | -52 | 6 | TTGTTCCAACCTTGGAACAA | TK0424 |
Thermococcus onnurineus NA1 | ||||
Position: -53
Score: 6.34218 Sequence: TTATTCCAATTTTGGAACAA
Locus tag: TON_0610
Name: ribD Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: TON_0609
Name: ribE Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
Locus tag: TON_0608
Name: ribBA Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: TON_0607
Name: ribH Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
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ribD-ribE-ribBA-ribH | -53 | 6.3 | TTATTCCAATTTTGGAACAA | TON_0610 |