Orthologous regulated operons containing COG3090 gene

Properties
Regulog:	HypR2 - Rhodobacterales
Regulator type:	Transcription factor
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Proline and 4-hydrohyproline utilization
Effector:	4-hydroxyproline
Phylum:	Proteobacteria/alpha

Built upon 17 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Silicibacter pomeroyi DSS-3
Position: -172 Score: 4.9554 Sequence: TTCTGTATCCAAAA Position: -38 Score: 4.12505 Sequence: ATCTGTATCCGAAA Locus tag: SPOA0267 Name: hypD Funciton: 1-pyrroline-4-hydroxy-2-carboxylate deaminase (EC 3.5.4.22) # predicted Locus tag: SPOA0266 Name: hypE Funciton: Proline racemase /4-hydroxyproline epimerase (EC 5.1.1.8) Locus tag: SPOA0265 Name: COG4663 Funciton: TRAP-type C4-dicarboxylate transport system, periplasmic component Locus tag: SPOA0264 Name: COG3090 Funciton: TRAP-type C4-dicarboxylate transport system, small permease component Locus tag: SPOA0263 Name: COG4664 Funciton: TRAP-type C4-dicarboxylate transport system, large permease component Locus tag: SPOA0262 Name: hypO Funciton: D-amino acid dehydrogenase (EC 1.4.99.1) family protein in hydroxy-L-proline catabolic cluster Locus tag: SPOA0261 Name: hypR2 Funciton: Predicted regulator for proline and hydrohyproline utilization, GntR family
hypD-hypE-COG4663-COG3090-COG4664-hypO-hypR2	-172	5	TTCTGTATCCAAAA	SPOA0267
	-38	4.1	ATCTGTATCCGAAA

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --