Orthologous regulated operons containing rafR gene

Properties
Regulog:	RafR - Bifidobacteriaceae
Regulator type:	Transcription factor
Regulator family:	ROK
Regulation mode:	activator
Biological process:	Raffinose utilization
Effector:
Phylum:	Actinobacteria

Built upon 17 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Bifidobacterium adolescentis ATCC 15703
Position: -47 Score: 5.52088 Sequence: TATTTTGTTATTCTTGGAAAGTA Locus tag: BAD_1575 Name: rafR Funciton: Raffinose utilization transcriptional regulator, ROK family
rafR	-47	5.5	TATTTTGTTATTCTTGGAAAGTA	BAD_1575
Bifidobacterium angulatum DSM 20098
Position: -22 Score: 3.7839 Sequence: TAGTTACTCTTGGATAGTAAATA Locus tag: BIFANG_00405 Name: rafR Funciton: Raffinose utilization transcriptional regulator, ROK family
rafR	-22	3.8	TAGTTACTCTTGGATAGTAAATA	BIFANG_00405
Bifidobacterium animalis subsp. lactis AD011
Position: -13 Score: 4.14775 Sequence: TATTTATATACTCATGGAAACTA Locus tag: BLA_1523 Name: rafR Funciton: Raffinose utilization transcriptional regulator, ROK family
rafR	-13	4.1	TATTTATATACTCATGGAAACTA	BLA_1523
Bifidobacterium breve DSM 20213
Position: -25 Score: 5.54311 Sequence: TATTTTGTGATTAACGCAATAAA Locus tag: BIFBRE_00617 Name: rafR Funciton: Raffinose utilization transcriptional regulator, ROK family
rafR	-25	5.5	TATTTTGTGATTAACGCAATAAA	BIFBRE_00617
Bifidobacterium dentium Bd1
Position: -115 Score: 5.2507 Sequence: GATTTTGTTATTCTGAGAAAGTA Locus tag: BDP_2227 Name: rafR Funciton: Raffinose utilization transcriptional regulator, ROK family
rafR	-115	5.3	GATTTTGTTATTCTGAGAAAGTA	BDP_2227
Bifidobacterium longum NCC2705
Position: -41 Score: 5.54311 Sequence: TATTTTGTGATTAACGCAATAAA Locus tag: BL1520 Name: rafR Funciton: Raffinose utilization transcriptional regulator, ROK family
rafR	-41	5.5	TATTTTGTGATTAACGCAATAAA	BL1520
Bifidobacterium longum subsp. infantis ATCC 15697
Position: -43 Score: 5.54311 Sequence: TATTTTGTGATTAACGCAATAAA Locus tag: Blon_2459 Name: rafR Funciton: Raffinose utilization transcriptional regulator, ROK family
rafR	-43	5.5	TATTTTGTGATTAACGCAATAAA	Blon_2459

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Orthologous regulated operons containing rafR gene

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --