Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing crtD gene

Properties
Regulog: PpsR - Rhodobacterales
Regulator type: Transcription factor
Regulator family: [Other]
Regulation mode: repressor
Biological process: Photosynthesis
Effector: Blue light
Phylum: Proteobacteria/alpha
Built upon 74 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Jannaschia sp. CCS1
Position: -50
Score: 4.79848
Sequence: TGTAAATCAGACTGGACA
Position: -19
Score: 5.20023
Sequence: TGTCAACATTGACTGACA
Locus tag: Jann_0183
Name: crtD
Funciton: Methoxyneurosporene dehydrogenase (EC 1.14.99.-)
Locus tag: Jann_0184
Name: ctrC
Funciton: Hydroxyneurosporene synthase
crtD-ctrC -50 4.8 TGTAAATCAGACTGGACA Jann_0183
-19 5.2 TGTCAACATTGACTGACA
Loktanella vestfoldensis SKA53
Position: -61
Score: 5.21776
Sequence: TGTCTATTTTAGTTTACA
Position: -35
Score: 4.49092
Sequence: TGTAAATCAAACGATACA
Locus tag: SKA53_12313
Name: crtD
Funciton: Methoxyneurosporene dehydrogenase (EC 1.14.99.-)
Locus tag: SKA53_12308
Name: ctrC
Funciton: Hydroxyneurosporene synthase
crtD-ctrC -61 5.2 TGTCTATTTTAGTTTACA SKA53_12313
-35 4.5 TGTAAATCAAACGATACA
Rhodobacter sphaeroides 2.4.1
Position: -72
Score: 5.06974
Sequence: TGTCAACTTTTTCTTACA
Locus tag: RSP_0266
Name: crtD
Funciton: Methoxyneurosporene dehydrogenase (EC 1.14.99.-)
Locus tag: RSP_0267
Name: ctrC
Funciton: Hydroxyneurosporene synthase
crtD-ctrC -72 5.1 TGTCAACTTTTTCTTACA RSP_0266
Roseovarius sp. 217
Position: -72
Score: 4.46251
Sequence: TGTATCACAAATCTGACA
Position: -47
Score: 4.96068
Sequence: TGTAAATCATACTGGACA
Locus tag: ROS217_22347
Name: crtD
Funciton: Methoxyneurosporene dehydrogenase (EC 1.14.99.-)
Locus tag: ROS217_22352
Name: ctrC
Funciton: Hydroxyneurosporene synthase
crtD-ctrC -72 4.5 TGTATCACAAATCTGACA ROS217_22347
-47 5 TGTAAATCATACTGGACA
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