Orthologous regulated operons containing pufB gene
| Regulog: | PpsR - Rhodobacterales |
| Regulator type: | Transcription factor |
| Regulator family: | [Other] |
| Regulation mode: | repressor |
| Biological process: | Photosynthesis |
| Effector: | Blue light |
| Phylum: | Proteobacteria/alpha |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Jannaschia sp. CCS1 | ||||
|
Position: -125
Score: 4.95241 Sequence: TGTCTATTCACGTTGACA
Position: -99
Score: 5.44958 Sequence: TGTCAGGTTAAACTGACA
Locus tag: Jann_0180
Name: bchC Funciton: Chlorophyll synthesis pathway, bchC
Locus tag: Jann_0179
Name: bchX Funciton: Chlorophyllide reductase subunit BchX (EC 1.18.-.-)
Locus tag: Jann_0178
Name: bchY Funciton: Chlorophyllide reductase subunit BchY (EC 1.18.-.-)
Locus tag: Jann_0177
Name: bchZ Funciton: Chlorophyllide reductase subunit BchZ (EC 1.18.-.-)
Locus tag: Jann_0176
Name: pufQ Funciton: Protein PufQ, involved in assembly of B875 and B800-850 pigment-protein complexes
Locus tag: Jann_0175
Name: pufB Funciton: Light-harvesting LHI, beta subunit
Locus tag: Jann_0174
Name: pufA Funciton: Light-harvesting LHI, alpha subunit
Locus tag: Jann_0173
Name: pufL Funciton: Photosynthetic reaction center L subunit
Locus tag: Jann_0172
Name: pufM Funciton: Photosynthetic reaction center M subunit
Locus tag: Jann_0171
Name: pufC Funciton: Photosynthetic reaction center cytochrome c subunit
Locus tag: Jann_0170
Name: dxsA Funciton: 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) |
||||
| bchC-bchX-bchY-bchZ-pufQ-pufB-pufA-pufL-pufM-pufC-dxsA | -125 | 5 | TGTCTATTCACGTTGACA | Jann_0180 |
| -99 | 5.4 | TGTCAGGTTAAACTGACA | ||
| Loktanella vestfoldensis SKA53 | ||||
|
Position: -181
Score: 5.14881 Sequence: TGTAAGGTAAAGTTTACA
Position: -156
Score: 4.84589 Sequence: TGTCTAAAAGAATTGACA
Locus tag: SKA53_12328
Name: bchC Funciton: Chlorophyll synthesis pathway, bchC
Locus tag: SKA53_12333
Name: bchX Funciton: Chlorophyllide reductase subunit BchX (EC 1.18.-.-)
Locus tag: SKA53_12338
Name: null Funciton: hypothetical protein
Locus tag: SKA53_12343
Name: bchY Funciton: Chlorophyllide reductase subunit BchY (EC 1.18.-.-)
Locus tag: SKA53_12348
Name: bchZ Funciton: Chlorophyllide reductase subunit BchZ (EC 1.18.-.-)
Locus tag: SKA53_12353
Name: pufQ Funciton: Protein PufQ, involved in assembly of B875 and B800-850 pigment-protein complexes
Locus tag: SKA53_12358
Name: pufB Funciton: Light-harvesting LHI, beta subunit
Locus tag: SKA53_12363
Name: pufA Funciton: Light-harvesting LHI, alpha subunit
Locus tag: SKA53_12368
Name: pufL Funciton: Photosynthetic reaction center L subunit
Locus tag: SKA53_12373
Name: pufM Funciton: Photosynthetic reaction center M subunit
Locus tag: SKA53_12378
Name: null Funciton: Protein PufX, involved in assembly of B875 and B800-850 pigment-protein complexes
Locus tag: SKA53_12383
Name: dxsA Funciton: 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) |
||||
| bchC-bchX-SKA53_12338-bchY-bchZ-pufQ-pufB-pufA-pufL-pufM-SKA53_12378-dxsA | -181 | 5.1 | TGTAAGGTAAAGTTTACA | SKA53_12328 |
| -156 | 4.8 | TGTCTAAAAGAATTGACA | ||
| Rhodobacter sphaeroides 2.4.1 | ||||
|
Position: -116
Score: 5.32474 Sequence: TGTCCAATAAAGTTGACA
Position: -90
Score: 4.41339 Sequence: TGTCCCGTTAATGTTACA
Locus tag: RSP_0263
Name: bchC Funciton: Chlorophyll synthesis pathway, bchC
Locus tag: RSP_0262
Name: bchX Funciton: Chlorophyllide reductase subunit BchX (EC 1.18.-.-)
Locus tag: RSP_0261
Name: bchY Funciton: Chlorophyllide reductase subunit BchY (EC 1.18.-.-)
Locus tag: RSP_0260
Name: bchZ Funciton: Chlorophyllide reductase subunit BchZ (EC 1.18.-.-)
Locus tag: RSP_0259
Name: pufQ Funciton: Protein PufQ, involved in assembly of B875 and B800-850 pigment-protein complexes
Locus tag: RSP_6109
Name: pufK Funciton: Transcriptional regulatory protein pufK
Locus tag: RSP_6108
Name: pufB Funciton: Light-harvesting LHI, beta subunit
Locus tag: RSP_0258
Name: pufA Funciton: Light-harvesting LHI, alpha subunit
Locus tag: RSP_0257
Name: pufL Funciton: Photosynthetic reaction center L subunit
Locus tag: RSP_0256
Name: pufM Funciton: Photosynthetic reaction center M subunit
Locus tag: RSP_0255
Name: pufX Funciton: Protein PufX, involved in assembly of B875 and B800-850 pigment-protein complexes
Locus tag: RSP_0254
Name: dxsA Funciton: 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) |
||||
| bchC-bchX-bchY-bchZ-pufQ-pufK-pufB-pufA-pufL-pufM-pufX-dxsA | -116 | 5.3 | TGTCCAATAAAGTTGACA | RSP_0263 |
| -90 | 4.4 | TGTCCCGTTAATGTTACA | ||
| Roseovarius sp. 217 | ||||
|
Position: -187
Score: 4.6392 Sequence: TGTCAAGTCAGCCTGACG
Position: -153
Score: 5.11017 Sequence: TGTAAAGAAAGATTGACA
Position: -127
Score: 4.64746 Sequence: TGTCCGGTTACACTTACA
Locus tag: ROS217_22332
Name: bchC Funciton: Chlorophyll synthesis pathway, bchC
Locus tag: ROS217_22327
Name: bchX Funciton: Chlorophyllide reductase subunit BchX (EC 1.18.-.-)
Locus tag: ROS217_22322
Name: bchY Funciton: Chlorophyllide reductase subunit BchY (EC 1.18.-.-)
Locus tag: ROS217_22317
Name: bchZ Funciton: Chlorophyllide reductase subunit BchZ (EC 1.18.-.-)
Locus tag: ROS217_22312
Name: pufQ Funciton: Protein PufQ, involved in assembly of B875 and B800-850 pigment-protein complexes
Locus tag: ROS217_22307
Name: pufB Funciton: Light-harvesting LHI, beta subunit
Locus tag: ROS217_22302
Name: pufA Funciton: Light-harvesting LHI, alpha subunit
Locus tag: ROS217_22297
Name: pufL Funciton: Photosynthetic reaction center L subunit
Locus tag: ROS217_22292
Name: pufM Funciton: Photosynthetic reaction center M subunit
Locus tag: ROS217_22287
Name: pufC Funciton: Photosynthetic reaction center cytochrome c subunit
Locus tag: ROS217_22282
Name: dxsA Funciton: 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) |
||||
| bchC-bchX-bchY-bchZ-pufQ-pufB-pufA-pufL-pufM-pufC-dxsA | -187 | 4.6 | TGTCAAGTCAGCCTGACG | ROS217_22332 |
| -153 | 5.1 | TGTAAAGAAAGATTGACA | ||
| -127 | 4.6 | TGTCCGGTTACACTTACA | ||