Orthologous regulated operons containing rarA gene
| Regulog: | LexA - Bifidobacteriaceae |
| Regulator type: | Transcription factor |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Phylum: | Actinobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Bifidobacterium adolescentis ATCC 15703 | ||||
|
Position: -48
Score: 5.75759 Sequence: TCGAACGTGTGTTCGA
Locus tag: BAD_0585
Name: rarA Funciton: Recombination factor protein RarA |
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| rarA | -48 | 5.8 | TCGAACGTGTGTTCGA | BAD_0585 |
| Bifidobacterium animalis subsp. lactis AD011 | ||||
|
Position: -56
Score: 6.1123 Sequence: TCGAACATTTGTTCGA
Locus tag: BLA_1204
Name: rarA Funciton: Recombination factor protein RarA |
||||
| rarA | -56 | 6.1 | TCGAACATTTGTTCGA | BLA_1204 |
| Bifidobacterium bifidum NCIMB 41171 | ||||
|
Position: -38
Score: 5.61771 Sequence: TCGAACCTATGTTCGA
Locus tag: BbifN4_010100002924
Name: rarA Funciton: Recombination factor protein RarA |
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| rarA | -38 | 5.6 | TCGAACCTATGTTCGA | BbifN4_010100002924 |
| Bifidobacterium breve DSM 20213 | ||||
|
Position: -39
Score: 5.87419 Sequence: TCGAACGTCTGTTCGA
Locus tag: BIFBRE_00563
Name: rarA Funciton: Recombination factor protein RarA |
||||
| rarA | -39 | 5.9 | TCGAACGTCTGTTCGA | BIFBRE_00563 |
| Bifidobacterium dentium Bd1 | ||||
|
Position: -21
Score: 5.75759 Sequence: TCGAACGTGTGTTCGA
Locus tag: BDP_0795
Name: rarA Funciton: Recombination factor protein RarA |
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| rarA | -21 | 5.8 | TCGAACGTGTGTTCGA | BDP_0795 |
| Bifidobacterium gallicum DSM 20093 | ||||
|
Position: -68
Score: 6.2832 Sequence: TCGAACATATGTTCGA
Locus tag: BIFGAL_01848
Name: rarA Funciton: Recombination factor protein RarA |
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| rarA | -68 | 6.3 | TCGAACATATGTTCGA | BIFGAL_01848 |
| Bifidobacterium longum NCC2705 | ||||
|
Position: -39
Score: 5.87419 Sequence: TCGAACGTCTGTTCGA
Locus tag: BL0029
Name: rarA Funciton: Recombination factor protein RarA |
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| rarA | -39 | 5.9 | TCGAACGTCTGTTCGA | BL0029 |
| Bifidobacterium longum subsp. infantis ATCC 15697 | ||||
|
Position: -39
Score: 5.87419 Sequence: TCGAACGTCTGTTCGA
Locus tag: Blon_0716
Name: rarA Funciton: Recombination factor protein RarA |
||||
| rarA | -39 | 5.9 | TCGAACGTCTGTTCGA | Blon_0716 |
| Gardnerella vaginalis 409-05 | ||||
|
Position: -38
Score: 5.56614 Sequence: TCGAACGTTTGTTCTA
Locus tag: HMPREF0424_0826
Name: rarA Funciton: Recombination factor protein RarA |
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| rarA | -38 | 5.6 | TCGAACGTTTGTTCTA | HMPREF0424_0826 |