Orthologous regulated operons containing araB gene
| Regulog: | AraQ - Bifidobacteriaceae |
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | |
| Biological process: | Central carbohydrate metabolism; Arabinose utilization; Arabinose oligosaccharide utilization |
| Effector: | |
| Phylum: | Actinobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Bifidobacterium adolescentis ATCC 15703 | ||||
|
Position: -82
Score: 5.25024 Sequence: AATAGTGAGCGTTAACAGTG
Position: -69
Score: 5.49563 Sequence: AACAGTGAGCGCTAACATTC
Locus tag: BAD_1412
Name: araB Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: BAD_1411
Name: araD Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Locus tag: BAD_1410
Name: araA Funciton: L-arabinose isomerase (EC 5.3.1.4) |
||||
| araB-araD-araA | -82 | 5.3 | AATAGTGAGCGTTAACAGTG | BAD_1412 |
| -69 | 5.5 | AACAGTGAGCGCTAACATTC | ||
| Bifidobacterium angulatum DSM 20098 | ||||
|
Position: -347
Score: 5.28202 Sequence: TTTTGAGAGCGTTCACATCA
Position: -176
Score: 5.35149 Sequence: AAATGTGAGCGATAACATTT
Locus tag: BIFANG_00188
Name: araE Funciton: L-arabinose-proton symporter
Locus tag: BIFANG_00187
Name: araB Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: BIFANG_00186
Name: araD Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Locus tag: BIFANG_00185
Name: araA Funciton: L-arabinose isomerase (EC 5.3.1.4) |
||||
| araE-araB-araD-araA | -347 | 5.3 | TTTTGAGAGCGTTCACATCA | BIFANG_00188 |
| -176 | 5.4 | AAATGTGAGCGATAACATTT | ||
| Bifidobacterium animalis subsp. lactis AD011 | ||||
|
Position: -213
Score: 5.00598 Sequence: TCATGTTACCGCTCACAAGA
Position: -70
Score: 5.92037 Sequence: TTGTGTGAGCGCTAACATAT
Locus tag: BLA_0056
Name: araB Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: BLA_0057
Name: araD Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Locus tag: BLA_0058
Name: araA Funciton: L-arabinose isomerase (EC 5.3.1.4) |
||||
| araB-araD-araA | -213 | 5 | TCATGTTACCGCTCACAAGA | BLA_0056 |
| -70 | 5.9 | TTGTGTGAGCGCTAACATAT | ||
| Bifidobacterium dentium Bd1 | ||||
|
Position: -81
Score: 5.25024 Sequence: AATAGTGAGCGTTAACAGTG
Position: -68
Score: 5.49563 Sequence: AACAGTGAGCGCTAACATTC
Locus tag: BDP_1924
Name: araB Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: BDP_1923
Name: araD Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Locus tag: BDP_1922
Name: araA Funciton: L-arabinose isomerase (EC 5.3.1.4) |
||||
| araB-araD-araA | -81 | 5.3 | AATAGTGAGCGTTAACAGTG | BDP_1924 |
| -68 | 5.5 | AACAGTGAGCGCTAACATTC | ||
| Bifidobacterium gallicum DSM 20093 | ||||
|
Position: -2
Score: 5.74335 Sequence: AAATGTTAGCGCTAACATAC
Locus tag: BIFGAL_00651
Name: araB Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: BIFGAL_00650
Name: araD Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Locus tag: BIFGAL_00649
Name: araA Funciton: L-arabinose isomerase (EC 5.3.1.4) |
||||
| araB-araD-araA | -2 | 5.7 | AAATGTTAGCGCTAACATAC | BIFGAL_00651 |
| Bifidobacterium longum NCC2705 | ||||
|
Position: -70
Score: 5.84275 Sequence: AATTGTGAGCGCTAACACCC
Locus tag: BL0274
Name: araB Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: BL0273
Name: araD Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Locus tag: BL0272
Name: araA Funciton: L-arabinose isomerase (EC 5.3.1.4) |
||||
| araB-araD-araA | -70 | 5.8 | AATTGTGAGCGCTAACACCC | BL0274 |