Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing xylA gene

Properties
Regulog: XylR - Bifidobacteriaceae
Regulator type: Transcription factor
Regulator family: ROK
Regulation mode:
Biological process: Xylose utilization
Effector: Xylose
Phylum: Actinobacteria
Built upon 24 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Bifidobacterium adolescentis ATCC 15703
Position: -117
Score: 5.02981
Sequence: TATAGTTTAACGAATTGACAAAC
Position: -95
Score: 4.90392
Sequence: CTTAGGTAATTCAATTTATTATG
Locus tag: BAD_0422
Name: xylA
Funciton: Xylose isomerase (EC 5.3.1.5)
xylA -117 5 TATAGTTTAACGAATTGACAAAC BAD_0422
-95 4.9 CTTAGGTAATTCAATTTATTATG
Bifidobacterium angulatum DSM 20098
Position: -118
Score: 4.89964
Sequence: TATAGTTCAACGAATTGACAAAC
Position: -96
Score: 4.92325
Sequence: CTTAGGTAATTCATTTTATTATC
Locus tag: BIFANG_00036
Name: xylA
Funciton: Xylose isomerase (EC 5.3.1.5)
xylA -118 4.9 TATAGTTCAACGAATTGACAAAC BIFANG_00036
-96 4.9 CTTAGGTAATTCATTTTATTATC
Bifidobacterium animalis subsp. lactis AD011
Position: -122
Score: 5.13614
Sequence: TATAGTATTTTCGTTTTACTATA
Locus tag: BLA_0485
Name: xylA
Funciton: Xylose isomerase (EC 5.3.1.5)
xylA -122 5.1 TATAGTATTTTCGTTTTACTATA BLA_0485
Bifidobacterium dentium Bd1
Position: -97
Score: 4.88088
Sequence: CTTAGGTAGATGAATTTATTATG
Locus tag: BDP_0561
Name: xylA
Funciton: Xylose isomerase (EC 5.3.1.5)
xylA -97 4.9 CTTAGGTAGATGAATTTATTATG BDP_0561
Bifidobacterium gallicum DSM 20093
Position: -164
Score: 5.07648
Sequence: TATAATTCAATGATTTGACAAAT
Position: -142
Score: 5.0842
Sequence: TATAGTTTAACGGTTTTACCATG
Locus tag: BIFGAL_00965
Name: xylA
Funciton: Xylose isomerase (EC 5.3.1.5)
xylA -164 5.1 TATAATTCAATGATTTGACAAAT BIFGAL_00965
-142 5.1 TATAGTTTAACGGTTTTACCATG
Bifidobacterium longum NCC2705
Position: -89
Score: 4.79817
Sequence: ATTAATTCAATCATTTGACAAAC
Position: -67
Score: 5.01104
Sequence: CTTAGTTCGTTCGTTTTATTATT
Locus tag: BL1704
Name: xylA
Funciton: Xylose isomerase (EC 5.3.1.5)
xylA -89 4.8 ATTAATTCAATCATTTGACAAAC BL1704
-67 5 CTTAGTTCGTTCGTTTTATTATT
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