Orthologous regulated operons containing lnbA gene
| Regulog: | NagR - Bifidobacteriaceae |
| Regulator type: | Transcription factor |
| Regulator family: | ROK |
| Regulation mode: | |
| Biological process: | Lacto-N-biose utilization; Galacto-N-biose utilization |
| Effector: | N-acetylglucosamine-6-phosphate |
| Phylum: | Actinobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Bifidobacterium bifidum NCIMB 41171 | ||||
|
Position: -101
Score: 4.71854 Sequence: AAATGTTAATGTAGTTGACATTT
Locus tag: BbifN4_010100004949
Name: lnbA Funciton: Predicted galacto-N-biose-/lacto-N-biose ABC transporter, substrate-binding protein
Locus tag: BbifN4_010100004944
Name: lnbB Funciton: Predicted galacto-N-biose-/lacto-N-biose ABC transporter, permease component 1
Locus tag: BbifN4_010100004939
Name: lnbC Funciton: Predicted galacto-N-biose-/lacto-N-biose ABC transporter, permease component 2 |
||||
| lnbA-lnbB-lnbC | -101 | 4.7 | AAATGTTAATGTAGTTGACATTT | BbifN4_010100004949 |
| Bifidobacterium breve DSM 20213 | ||||
|
Position: -184
Score: 4.5779 Sequence: CTTTGTAAGGAGTATTAATAAAA
Position: -96
Score: 5.201 Sequence: AATTGTTAGTTAGGTTGACAATA
Locus tag: BIFBRE_00332
Name: lnbA Funciton: Predicted galacto-N-biose-/lacto-N-biose ABC transporter, substrate-binding protein
Locus tag: BIFBRE_00333
Name: lnbB Funciton: Predicted galacto-N-biose-/lacto-N-biose ABC transporter, permease component 1
Locus tag: BIFBRE_00334
Name: lnbC Funciton: Predicted galacto-N-biose-/lacto-N-biose ABC transporter, permease component 2
Locus tag: BIFBRE_00335
Name: lnpA Funciton: 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase (EC:2.4.1.211) |
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| lnbA-lnbB-lnbC-lnpA | -184 | 4.6 | CTTTGTAAGGAGTATTAATAAAA | BIFBRE_00332 |
| -96 | 5.2 | AATTGTTAGTTAGGTTGACAATA | ||
| Bifidobacterium longum NCC2705 | ||||
|
Position: -95
Score: 5.175 Sequence: AATTGTTAGCTAAGTTGACAATA
Locus tag: BL1638
Name: lnbA Funciton: Predicted galacto-N-biose-/lacto-N-biose ABC transporter, substrate-binding protein
Locus tag: BL1639
Name: lnbB Funciton: Predicted galacto-N-biose-/lacto-N-biose ABC transporter, permease component 1
Locus tag: BL1640
Name: lnbC Funciton: Predicted galacto-N-biose-/lacto-N-biose ABC transporter, permease component 2
Locus tag: BL1641
Name: lnpA Funciton: 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase (EC:2.4.1.211)
Locus tag: BL1642
Name: nahK Funciton: N-acetylhexosamine 1-kinase (EC:2.7.1.162)
Locus tag: BL1643
Name: galT2 Funciton: UDP-glucose--hexose-1-phosphate uridylyltransferase (EC:2.7.7.12)
Locus tag: BL1644
Name: galE2 Funciton: UDP-glucose 4-epimerase (EC 5.1.3.2) |
||||
| lnbA-lnbB-lnbC-lnpA-nahK-galT2-galE2 | -95 | 5.2 | AATTGTTAGCTAAGTTGACAATA | BL1638 |
| Bifidobacterium longum subsp. infantis ATCC 15697 | ||||
|
Position: -175
Score: 3.99586 Sequence: GTGAGTTAATGAAATGAACAAAC
Position: -95
Score: 4.94539 Sequence: AATTGTTAGTTGGGTTGACAATA
Position: -31
Score: 4.11728 Sequence: TTTTGATGATCAACCTCACAAAG
Locus tag: Blon_2177
Name: lnbA Funciton: Predicted galacto-N-biose-/lacto-N-biose ABC transporter, substrate-binding protein
Locus tag: Blon_2176
Name: lnbB Funciton: Predicted galacto-N-biose-/lacto-N-biose ABC transporter, permease component 1
Locus tag: Blon_2175
Name: lnbC Funciton: Predicted galacto-N-biose-/lacto-N-biose ABC transporter, permease component 2
Locus tag: Blon_2174
Name: lnpA Funciton: 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase (EC:2.4.1.211)
Locus tag: Blon_2173
Name: nahK Funciton: N-acetylhexosamine 1-kinase (EC:2.7.1.162)
Locus tag: Blon_2172
Name: galT2 Funciton: UDP-glucose--hexose-1-phosphate uridylyltransferase (EC:2.7.7.12)
Locus tag: Blon_2171
Name: galE2 Funciton: UDP-glucose 4-epimerase (EC 5.1.3.2) |
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| lnbA-lnbB-lnbC-lnpA-nahK-galT2-galE2 | -175 | 4 | GTGAGTTAATGAAATGAACAAAC | Blon_2177 |
| -95 | 4.9 | AATTGTTAGTTGGGTTGACAATA | ||
| -31 | 4.1 | TTTTGATGATCAACCTCACAAAG | ||