Orthologous regulated operons containing lnbA gene

Properties
Regulog:	NagR - Bifidobacteriaceae
Regulator type:	Transcription factor
Regulator family:	ROK
Regulation mode:
Biological process:	Lacto-N-biose utilization; Galacto-N-biose utilization
Effector:	N-acetylglucosamine-6-phosphate
Phylum:	Actinobacteria

Built upon 28 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Bifidobacterium bifidum NCIMB 41171
Position: -101 Score: 4.71854 Sequence: AAATGTTAATGTAGTTGACATTT Locus tag: BbifN4_010100004949 Name: lnbA Funciton: Predicted galacto-N-biose-/lacto-N-biose ABC transporter, substrate-binding protein Locus tag: BbifN4_010100004944 Name: lnbB Funciton: Predicted galacto-N-biose-/lacto-N-biose ABC transporter, permease component 1 Locus tag: BbifN4_010100004939 Name: lnbC Funciton: Predicted galacto-N-biose-/lacto-N-biose ABC transporter, permease component 2
lnbA-lnbB-lnbC	-101	4.7	AAATGTTAATGTAGTTGACATTT	BbifN4_010100004949
Bifidobacterium breve DSM 20213
Position: -184 Score: 4.5779 Sequence: CTTTGTAAGGAGTATTAATAAAA Position: -96 Score: 5.201 Sequence: AATTGTTAGTTAGGTTGACAATA Locus tag: BIFBRE_00332 Name: lnbA Funciton: Predicted galacto-N-biose-/lacto-N-biose ABC transporter, substrate-binding protein Locus tag: BIFBRE_00333 Name: lnbB Funciton: Predicted galacto-N-biose-/lacto-N-biose ABC transporter, permease component 1 Locus tag: BIFBRE_00334 Name: lnbC Funciton: Predicted galacto-N-biose-/lacto-N-biose ABC transporter, permease component 2 Locus tag: BIFBRE_00335 Name: lnpA Funciton: 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase (EC:2.4.1.211)
lnbA-lnbB-lnbC-lnpA	-184	4.6	CTTTGTAAGGAGTATTAATAAAA	BIFBRE_00332
	-96	5.2	AATTGTTAGTTAGGTTGACAATA
Bifidobacterium longum NCC2705
Position: -95 Score: 5.175 Sequence: AATTGTTAGCTAAGTTGACAATA Locus tag: BL1638 Name: lnbA Funciton: Predicted galacto-N-biose-/lacto-N-biose ABC transporter, substrate-binding protein Locus tag: BL1639 Name: lnbB Funciton: Predicted galacto-N-biose-/lacto-N-biose ABC transporter, permease component 1 Locus tag: BL1640 Name: lnbC Funciton: Predicted galacto-N-biose-/lacto-N-biose ABC transporter, permease component 2 Locus tag: BL1641 Name: lnpA Funciton: 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase (EC:2.4.1.211) Locus tag: BL1642 Name: nahK Funciton: N-acetylhexosamine 1-kinase (EC:2.7.1.162) Locus tag: BL1643 Name: galT2 Funciton: UDP-glucose--hexose-1-phosphate uridylyltransferase (EC:2.7.7.12) Locus tag: BL1644 Name: galE2 Funciton: UDP-glucose 4-epimerase (EC 5.1.3.2)
lnbA-lnbB-lnbC-lnpA-nahK-galT2-galE2	-95	5.2	AATTGTTAGCTAAGTTGACAATA	BL1638
Bifidobacterium longum subsp. infantis ATCC 15697
Position: -175 Score: 3.99586 Sequence: GTGAGTTAATGAAATGAACAAAC Position: -95 Score: 4.94539 Sequence: AATTGTTAGTTGGGTTGACAATA Position: -31 Score: 4.11728 Sequence: TTTTGATGATCAACCTCACAAAG Locus tag: Blon_2177 Name: lnbA Funciton: Predicted galacto-N-biose-/lacto-N-biose ABC transporter, substrate-binding protein Locus tag: Blon_2176 Name: lnbB Funciton: Predicted galacto-N-biose-/lacto-N-biose ABC transporter, permease component 1 Locus tag: Blon_2175 Name: lnbC Funciton: Predicted galacto-N-biose-/lacto-N-biose ABC transporter, permease component 2 Locus tag: Blon_2174 Name: lnpA Funciton: 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase (EC:2.4.1.211) Locus tag: Blon_2173 Name: nahK Funciton: N-acetylhexosamine 1-kinase (EC:2.7.1.162) Locus tag: Blon_2172 Name: galT2 Funciton: UDP-glucose--hexose-1-phosphate uridylyltransferase (EC:2.7.7.12) Locus tag: Blon_2171 Name: galE2 Funciton: UDP-glucose 4-epimerase (EC 5.1.3.2)
lnbA-lnbB-lnbC-lnpA-nahK-galT2-galE2	-175	4	GTGAGTTAATGAAATGAACAAAC	Blon_2177
	-95	4.9	AATTGTTAGTTGGGTTGACAATA
	-31	4.1	TTTTGATGATCAACCTCACAAAG