Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing araD gene

Properties
Regulog: AraR - Bacteroidaceae
Regulator type: Transcription factor
Regulator family: NrtR
Regulation mode: repressor
Biological process: Arabinose utilization
Effector: Arabinose
Phylum: Bacteroidetes
Built upon 28 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Bacteroides cellulosilyticus DSM 14838
Position: -84
Score: 5.56571
Sequence: CAAGTGTTACTAATACACTCA
Position: -60
Score: 5.75141
Sequence: AAAGTGTTACTTTTACACCCA
Locus tag: BACCELL_05604
Name: araM
Funciton: L-arabinose mutarotase
Locus tag: BACCELL_05605
Name: araP
Funciton: Predicted sodium-dependent arabinose transporter, MFS family
Locus tag: BACCELL_05606
Name: araR
Funciton: Transcriptional regulator for arabinose utilization, NrtR family
Locus tag: BACCELL_05607
Name: araD
Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Locus tag: BACCELL_05608
Name: araA
Funciton: L-arabinose isomerase (EC 5.3.1.4)
Locus tag: BACCELL_05609
Name: araB
Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: BACCELL_05610
Name: COG3533
Funciton: COG3533 secreted protein
Locus tag: BACCELL_05611
Name: abf1
Funciton: Alpha-N-arabinofuranosidase (EC 3.2.1.55), GH51 family
araM-araP-araR-araD-araA-araB-COG3533-abf1 -84 5.6 CAAGTGTTACTAATACACTCA BACCELL_05604
-60 5.8 AAAGTGTTACTTTTACACCCA
Bacteroides dorei DSM 17855
Position: -122
Score: 5.19825
Sequence: AAAGTGTAGGAAATACACTTT
Position: -59
Score: 5.5794
Sequence: ATAGTGTTACTTTTACACCCA
Locus tag: BACDOR_03634
Name: araM
Funciton: L-arabinose mutarotase
Locus tag: BACDOR_03633
Name: araP
Funciton: Predicted sodium-dependent arabinose transporter, MFS family
Locus tag: BACDOR_03632
Name: araR
Funciton: Transcriptional regulator for arabinose utilization, NrtR family
Locus tag: BACDOR_03631
Name: araD
Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Locus tag: BACDOR_03630
Name: araA
Funciton: L-arabinose isomerase (EC 5.3.1.4)
Locus tag: BACDOR_03629
Name: araB
Funciton: Ribulokinase (EC 2.7.1.16)
araM-araP-araR-araD-araA-araB -122 5.2 AAAGTGTAGGAAATACACTTT BACDOR_03634
-59 5.6 ATAGTGTTACTTTTACACCCA
Bacteroides eggerthii DSM 20697
Position: -84
Score: 5.71239
Sequence: AAAGTGTATATATTACACCAA
Position: -60
Score: 5.50468
Sequence: AAAGTGTTACTTTTACACCCG
Locus tag: BACEGG_01536
Name: araM
Funciton: L-arabinose mutarotase
Locus tag: BACEGG_01535
Name: araP
Funciton: Predicted sodium-dependent arabinose transporter, MFS family
Locus tag: BACEGG_01534
Name: araR
Funciton: Transcriptional regulator for arabinose utilization, NrtR family
Locus tag: BACEGG_01533
Name: araD
Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Locus tag: BACEGG_01532
Name: araA
Funciton: L-arabinose isomerase (EC 5.3.1.4)
Locus tag: BACEGG_01531
Name: araB
Funciton: Ribulokinase (EC 2.7.1.16)
araM-araP-araR-araD-araA-araB -84 5.7 AAAGTGTATATATTACACCAA BACEGG_01536
-60 5.5 AAAGTGTTACTTTTACACCCG
Bacteroides ovatus ATCC 8483
Position: -84
Score: 5.59526
Sequence: AGAGTGTATTTGATACACCAA
Position: -60
Score: 5.75141
Sequence: AAAGTGTTACTTTTACACCCA
Locus tag: BACOVA_01715
Name: araM
Funciton: L-arabinose mutarotase
Locus tag: BACOVA_01714
Name: araP
Funciton: Predicted sodium-dependent arabinose transporter, MFS family
Locus tag: BACOVA_01713
Name: araR
Funciton: Transcriptional regulator for arabinose utilization, NrtR family
Locus tag: BACOVA_01712
Name: araD
Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Locus tag: BACOVA_01711
Name: araA
Funciton: L-arabinose isomerase (EC 5.3.1.4)
Locus tag: BACOVA_01710
Name: araB
Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: BACOVA_01709
Name: COG3533
Funciton: COG3533 secreted protein
Locus tag: BACOVA_01708
Name: abf1
Funciton: Alpha-N-arabinofuranosidase (EC 3.2.1.55), GH51 family
araM-araP-araR-araD-araA-araB-COG3533-abf1 -84 5.6 AGAGTGTATTTGATACACCAA BACOVA_01715
-60 5.8 AAAGTGTTACTTTTACACCCA
Bacteroides plebeius DSM 17135
Position: -45
Score: 5.61214
Sequence: TAAGTGTTACTTTTACACCAT
Locus tag: BACPLE_02214
Name: araM
Funciton: L-arabinose mutarotase
Locus tag: BACPLE_02213
Name: araR
Funciton: Transcriptional regulator for arabinose utilization, NrtR family
Locus tag: BACPLE_02212
Name: araD
Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Locus tag: BACPLE_02211
Name: araA
Funciton: L-arabinose isomerase (EC 5.3.1.4)
Locus tag: BACPLE_02210
Name: araB
Funciton: Ribulokinase (EC 2.7.1.16)
araM-araR-araD-araA-araB -45 5.6 TAAGTGTTACTTTTACACCAT BACPLE_02214
Bacteroides thetaiotaomicron VPI-5482
Position: -84
Score: 5.59526
Sequence: AGAGTGTATTTGATACACCAA
Position: -60
Score: 5.75141
Sequence: AAAGTGTTACTTTTACACCCA
Locus tag: BT0356
Name: araM
Funciton: L-arabinose mutarotase
Locus tag: BT0355
Name: araP
Funciton: Predicted sodium-dependent arabinose transporter, MFS family
Locus tag: BT0354
Name: araR
Funciton: Transcriptional regulator for arabinose utilization, NrtR family
Locus tag: BT0353
Name: araD
Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Locus tag: BT0352
Name: BT0352
Funciton: hypothetical protein
Locus tag: BT0351
Name: araA
Funciton: L-arabinose isomerase (EC 5.3.1.4)
Locus tag: BT0350
Name: araB
Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: BT0349
Name: COG3533
Funciton: COG3533 secreted protein
Locus tag: BT0348
Name: abf1
Funciton: Alpha-N-arabinofuranosidase (EC 3.2.1.55), GH51 family
araM-araP-araR-araD-BT0352-araA-araB-COG3533-abf1 -84 5.6 AGAGTGTATTTGATACACCAA BT0356
-60 5.8 AAAGTGTTACTTTTACACCCA
Bacteroides uniformis ATCC 8492
Position: -27
Score: 4.20302
Sequence: AAAGTGTACAGCCTACACTAA
Position: -3
Score: 5.75141
Sequence: AAAGTGTTACTTTTACACCCA
Locus tag: BACUNI_01357
Name: araM
Funciton: L-arabinose mutarotase
Locus tag: BACUNI_01358
Name: araP
Funciton: Predicted sodium-dependent arabinose transporter, MFS family
Locus tag: BACUNI_01359
Name: araR
Funciton: Transcriptional regulator for arabinose utilization, NrtR family
Locus tag: BACUNI_01360
Name: araD
Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Locus tag: BACUNI_01361
Name: araA
Funciton: L-arabinose isomerase (EC 5.3.1.4)
Locus tag: BACUNI_01362
Name: araB
Funciton: Ribulokinase (EC 2.7.1.16)
araM-araP-araR-araD-araA-araB -27 4.2 AAAGTGTACAGCCTACACTAA BACUNI_01357
-3 5.8 AAAGTGTTACTTTTACACCCA
Bacteroides vulgatus ATCC 8482
Position: -122
Score: 5.19825
Sequence: AAAGTGTAGGAAATACACTTT
Position: -59
Score: 5.44013
Sequence: ATAGTGTTACTTTTACACCAA
Locus tag: BVU_2324
Name: araM
Funciton: L-arabinose mutarotase
Locus tag: BVU_2323
Name: araP
Funciton: Predicted sodium-dependent arabinose transporter, MFS family
Locus tag: BVU_2322
Name: araR
Funciton: Transcriptional regulator for arabinose utilization, NrtR family
Locus tag: BVU_2321
Name: araD
Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Locus tag: BVU_2320
Name: araA
Funciton: L-arabinose isomerase (EC 5.3.1.4)
Locus tag: BVU_2319
Name: araB
Funciton: Ribulokinase (EC 2.7.1.16)
araM-araP-araR-araD-araA-araB -122 5.2 AAAGTGTAGGAAATACACTTT BVU_2324
-59 5.4 ATAGTGTTACTTTTACACCAA
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