Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing COG3489 gene

Properties
Regulog: IscR - Rhodobacterales
Regulator type: Transcription factor
Regulator family: Rrf2
Regulation mode: repressor (activator)
Biological process: Iron-sulfur cluster biogenesis; Iron homeostasis
Effector: Iron-sulfur cluster redox state; Iron ion, (Fe2+)
Phylum: Proteobacteria/Alpha
Built upon 125 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Jannaschia sp. CCS1
Position: -253
Score: 4.74869
Sequence: TCTGACAAAACAAGTCAGG
Locus tag: Jann_1368
Name: irpA
Funciton: Iron-regulated protein A precursor
Locus tag: Jann_1369
Name: COG3488
Funciton: Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites
Locus tag: Jann_1370
Name: COG3489
Funciton: Predicted periplasmic lipoprotein
Locus tag: Jann_1371
Name: COG3490
Funciton: Uncharacterised conserved protein UCP028101
irpA-COG3488-COG3489-COG3490 -253 4.7 TCTGACAAAACAAGTCAGG Jann_1368
Rhodobacter sphaeroides 2.4.1
Position: -56
Score: 4.44905
Sequence: TCCGATTGAAAGACTCGGG
Locus tag: RSP_1545
Name: COG3488
Funciton: Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites
Locus tag: RSP_1544
Name: COG3489
Funciton: Predicted periplasmic lipoprotein
Locus tag: RSP_1543
Name: COG3490
Funciton: Uncharacterised conserved protein UCP028101
COG3488-COG3489-COG3490 -56 4.4 TCCGATTGAAAGACTCGGG RSP_1545
Roseobacter sp. MED193
Position: -103
Score: 4.35696
Sequence: CCTGACAAAAACAATAAGC
Position: -72
Score: 4.49226
Sequence: CCTTATTGTTTTTGTCAGA
Locus tag: MED193_19654
Name: bfd
Funciton: Bacterioferritin-associated ferredoxin
Locus tag: MED193_19649
Name: bfr
Funciton: Bacterioferritin (cytochrome b1)
Locus tag: MED193_19644
Name: COG3488
Funciton: Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites
Locus tag: MED193_19639
Name: COG3489
Funciton: Predicted periplasmic lipoprotein
Locus tag: MED193_19634
Name: COG3490
Funciton: Uncharacterised conserved protein UCP028101
bfd-bfr-COG3488-COG3489-COG3490 -103 4.4 CCTGACAAAAACAATAAGC MED193_19654
-72 4.5 CCTTATTGTTTTTGTCAGA
Roseovarius nubinhibens ISM
Position: -82
Score: 4.91682
Sequence: CCCGAGTATTTCACTCAGG
Locus tag: ISM_04365
Name: irpA
Funciton: Iron-regulated protein A precursor
Locus tag: ISM_04360
Name: COG3488
Funciton: Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites
Locus tag: ISM_04355
Name: COG3489
Funciton: Predicted periplasmic lipoprotein
Locus tag: ISM_04350
Name: COG3490
Funciton: Uncharacterised conserved protein UCP028101
irpA-COG3488-COG3489-COG3490 -82 4.9 CCCGAGTATTTCACTCAGG ISM_04365
Roseovarius sp. 217
Position: -147
Score: 4.56215
Sequence: GCCTACTAAATCAGTCAAC
Locus tag: ROS217_10107
Name: irpA
Funciton: Iron-regulated protein A precursor
Locus tag: ROS217_10102
Name: hmuX
Funciton: hypothetical porin
Locus tag: ROS217_10097
Name: COG3488
Funciton: Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites
Locus tag: ROS217_10092
Name: COG3489
Funciton: Predicted periplasmic lipoprotein
Locus tag: ROS217_10087
Name: COG3490
Funciton: Uncharacterised conserved protein UCP028101
irpA-hmuX-COG3488-COG3489-COG3490 -147 4.6 GCCTACTAAATCAGTCAAC ROS217_10107
Silicibacter TM1040
Position: -103
Score: 4.09226
Sequence: CCTGATCAAAACAGTCCGA
Position: -71
Score: 4.16035
Sequence: GCTTATTCTTTTACTCGGA
Locus tag: TM1040_2200
Name: bfd
Funciton: Bacterioferritin-associated ferredoxin
Locus tag: TM1040_2201
Name: bfr
Funciton: Bacterioferritin (cytochrome b1)
Locus tag: TM1040_2202
Name: COG3488
Funciton: Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites
Locus tag: TM1040_2203
Name: COG3489
Funciton: Predicted periplasmic lipoprotein
Locus tag: TM1040_2204
Name: COG3490
Funciton: Uncharacterised conserved protein UCP028101
bfd-bfr-COG3488-COG3489-COG3490 -103 4.1 CCTGATCAAAACAGTCCGA TM1040_2200
-71 4.2 GCTTATTCTTTTACTCGGA
Silicibacter pomeroyi DSS-3
Position: -88
Score: 5.17529
Sequence: ACTGACAAATTTAGTCAGA
Locus tag: SPO0086
Name: irpA
Funciton: Iron-regulated protein A precursor
Locus tag: SPO0087
Name: hmuX
Funciton: hypothetical porin
Locus tag: SPO0088
Name: COG3488
Funciton: Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites
Locus tag: SPO0089
Name: COG3489
Funciton: Predicted periplasmic lipoprotein
Locus tag: SPO0090
Name: COG3490
Funciton: Uncharacterised conserved protein UCP028101
irpA-hmuX-COG3488-COG3489-COG3490 -88 5.2 ACTGACAAATTTAGTCAGA SPO0086
Sulfitobacter sp. EE-36
Position: -140
Score: 4.78764
Sequence: TCTTACTAAAATTGTCGGG
Locus tag: EE36_02713
Name: irpA
Funciton: Iron-regulated protein A precursor
Locus tag: EE36_02708
Name: hmuX
Funciton: hypothetical porin
Locus tag: EE36_02703
Name: COG3488
Funciton: Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites
Locus tag: EE36_02698
Name: COG3489
Funciton: Predicted periplasmic lipoprotein
Locus tag: EE36_02693
Name: COG3490
Funciton: Uncharacterised conserved protein UCP028101
irpA-hmuX-COG3488-COG3489-COG3490 -140 4.8 TCTTACTAAAATTGTCGGG EE36_02713
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