Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing bfd gene

Properties
Regulog: IscR - Rhodobacterales
Regulator type: Transcription factor
Regulator family: Rrf2
Regulation mode: repressor (activator)
Biological process: Iron-sulfur cluster biogenesis; Iron homeostasis
Effector: Iron-sulfur cluster redox state; Iron ion, (Fe2+)
Phylum: Proteobacteria/Alpha
Built upon 125 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Oceanicola batsensis HTCC2597
Position: -125
Score: 4.07191
Sequence: GTTGATCGAAAAAGTCGGA
Position: -97
Score: 4.3382
Sequence: GGTGAGCAAAATAGTCAGG
Locus tag: OB2597_06825
Name: null
Funciton: hypothetical protein
Locus tag: OB2597_06820
Name: bfd
Funciton: Bacterioferritin-associated ferredoxin
Locus tag: OB2597_06815
Name: bfr
Funciton: Bacterioferritin (cytochrome b1)
OB2597_06825-bfd-bfr -125 4.1 GTTGATCGAAAAAGTCGGA OB2597_06825
-97 4.3 GGTGAGCAAAATAGTCAGG
Rhodobacter sphaeroides 2.4.1
Position: -228
Score: 3.92817
Sequence: ACCGACCGAAAGAATCAGC
Position: -200
Score: 4.68835
Sequence: TCCGACTGATTCAGTCACC
Locus tag: RSP_6006
Name: hemP
Funciton: Hemin uptake protein HemP
Locus tag: RSP_1548
Name: irpA
Funciton: Iron-regulated protein A precursor
Locus tag: RSP_1547
Name: bfd
Funciton: Bacterioferritin-associated ferredoxin
Locus tag: RSP_1546
Name: bfr
Funciton: Bacterioferritin (cytochrome b1)
hemP-irpA-bfd-bfr -228 3.9 ACCGACCGAAAGAATCAGC RSP_6006
-200 4.7 TCCGACTGATTCAGTCACC
Rhodobacterales bacterium HTCC2654
Position: -25
Score: 3.92748
Sequence: CCCGATCACTTTACTCGGG
Locus tag: RB2654_13154
Name: irpA
Funciton: Iron-regulated protein A precursor
Locus tag: RB2654_13144
Name: bfd
Funciton: Bacterioferritin-associated ferredoxin
irpA-bfd -25 3.9 CCCGATCACTTTACTCGGG RB2654_13154
Roseobacter sp. MED193
Position: -103
Score: 4.35696
Sequence: CCTGACAAAAACAATAAGC
Position: -72
Score: 4.49226
Sequence: CCTTATTGTTTTTGTCAGA
Locus tag: MED193_19654
Name: bfd
Funciton: Bacterioferritin-associated ferredoxin
Locus tag: MED193_19649
Name: bfr
Funciton: Bacterioferritin (cytochrome b1)
Locus tag: MED193_19644
Name: COG3488
Funciton: Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites
Locus tag: MED193_19639
Name: COG3489
Funciton: Predicted periplasmic lipoprotein
Locus tag: MED193_19634
Name: COG3490
Funciton: Uncharacterised conserved protein UCP028101
bfd-bfr-COG3488-COG3489-COG3490 -103 4.4 CCTGACAAAAACAATAAGC MED193_19654
-72 4.5 CCTTATTGTTTTTGTCAGA
Roseovarius nubinhibens ISM
Position: -205
Score: 5.20227
Sequence: TCTGACTAAAAAAGTCGGA
Position: -178
Score: 4.8089
Sequence: TCTGACAGAATAAATCAGA
Locus tag: ISM_01000
Name: hemP
Funciton: Hemin uptake protein HemP
Locus tag: ISM_00995
Name: bfd
Funciton: Bacterioferritin-associated ferredoxin
Locus tag: ISM_00990
Name: bfr
Funciton: Bacterioferritin (cytochrome b1)
hemP-bfd-bfr -205 5.2 TCTGACTAAAAAAGTCGGA ISM_01000
-178 4.8 TCTGACAGAATAAATCAGA
Silicibacter TM1040
Position: -103
Score: 4.09226
Sequence: CCTGATCAAAACAGTCCGA
Position: -71
Score: 4.16035
Sequence: GCTTATTCTTTTACTCGGA
Locus tag: TM1040_2200
Name: bfd
Funciton: Bacterioferritin-associated ferredoxin
Locus tag: TM1040_2201
Name: bfr
Funciton: Bacterioferritin (cytochrome b1)
Locus tag: TM1040_2202
Name: COG3488
Funciton: Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites
Locus tag: TM1040_2203
Name: COG3489
Funciton: Predicted periplasmic lipoprotein
Locus tag: TM1040_2204
Name: COG3490
Funciton: Uncharacterised conserved protein UCP028101
bfd-bfr-COG3488-COG3489-COG3490 -103 4.1 CCTGATCAAAACAGTCCGA TM1040_2200
-71 4.2 GCTTATTCTTTTACTCGGA
© 2009-2020 RegPrecise