Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing nrdD gene

Properties
Regulog: NrdR - Clostridia-3
Regulator type: Transcription factor
Regulator family: NrdR
Regulation mode: repressor
Biological process: Deoxyribonucleotide biosynthesis
Effector: Deoxyribonucleotides
Phylum: Firmicutes
Built upon 49 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Bacteroides pectinophilus ATCC 43243
Position: -147
Score: 5.11295
Sequence: GCACAATATATTGTTT
Position: -116
Score: 3.88826
Sequence: TTTCTATATTTGGTAG
Locus tag: BACPEC_00926
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: BACPEC_00927
Name: nrdG
Funciton: anaerobic ribonucleoside-triphosphate reductase activating protein
nrdD-nrdG -147 5.1 GCACAATATATTGTTT BACPEC_00926
-116 3.9 TTTCTATATTTGGTAG
Clostridiales bacterium 1_7_47_FAA
Position: -173
Score: 3.83212
Sequence: ATACATCCTATCGTAT
Position: -141
Score: 4.80858
Sequence: ACACAACATTTAGTGC
Locus tag: Cbac1_010100006828
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: Cbac1_010100006823
Name: nrdG
Funciton: anaerobic ribonucleoside-triphosphate reductase activating protein
nrdD-nrdG -173 3.8 ATACATCCTATCGTAT Cbac1_010100006828
-141 4.8 ACACAACATTTAGTGC
Clostridium bolteae ATCC BAA-613
Position: -171
Score: 3.96011
Sequence: ATACATCTTATCGTAT
Position: -140
Score: 4.98145
Sequence: ACACAACATTTAGTGG
Locus tag: CLOBOL_02823
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: CLOBOL_02822
Name: nrdG
Funciton: anaerobic ribonucleoside-triphosphate reductase activating protein
nrdD-nrdG -171 4 ATACATCTTATCGTAT CLOBOL_02823
-140 5 ACACAACATTTAGTGG
Clostridium scindens ATCC 35704
Position: -135
Score: 4.44694
Sequence: AAAGTAAATATTGTAT
Position: -67
Score: 4.58667
Sequence: GTGCTAGATATTGTAT
Position: -35
Score: 4.08906
Sequence: AACCAACATTTAGTGG
Locus tag: CLOSCI_01031
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: CLOSCI_01030
Name: nrdG
Funciton: anaerobic ribonucleoside-triphosphate reductase activating protein
nrdD-nrdG -135 4.4 AAAGTAAATATTGTAT CLOSCI_01031
-67 4.6 GTGCTAGATATTGTAT
-35 4.1 AACCAACATTTAGTGG
Dorea formicigenerans ATCC 27755
Position: -162
Score: 4.21833
Sequence: ACGCCATATTTTGTAG
Position: -129
Score: 5.03846
Sequence: ACACAATATCTTGTGA
Position: -64
Score: 4.8777
Sequence: ACACAAGATGTTGTGG
Locus tag: DORFOR_02443
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
nrdD -162 4.2 ACGCCATATTTTGTAG DORFOR_02443
-129 5 ACACAATATCTTGTGA
-64 4.9 ACACAAGATGTTGTGG
Dorea longicatena DSM 13814
Position: -102
Score: 4.56888
Sequence: GCACAATATCTTGTGC
Position: -70
Score: 4.9584
Sequence: AAACAATATTTAGTAG
Locus tag: DORLON_00953
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
nrdD -102 4.6 GCACAATATCTTGTGC DORLON_00953
-70 5 AAACAATATTTAGTAG
Eubacterium eligens ATCC 27750
Position: -178
Score: 5.07151
Sequence: TTACAAGATATTGTGT
Position: -146
Score: 4.58088
Sequence: AGCCTATATGTTGTAT
Locus tag: EUBELI_01571
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
nrdD -178 5.1 TTACAAGATATTGTGT EUBELI_01571
-146 4.6 AGCCTATATGTTGTAT
Eubacterium rectale ATCC 33656
Position: -284
Score: 4.73032
Sequence: CTACAAAATATTGTTG
Position: -253
Score: 4.85465
Sequence: CAACAATATCTTGTAT
Position: -26
Score: 5.50789
Sequence: ATACTATATATAGTAC
Locus tag: EUBREC_2400
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
nrdD -284 4.7 CTACAAAATATTGTTG EUBREC_2400
-253 4.9 CAACAATATCTTGTAT
-26 5.5 ATACTATATATAGTAC
Roseburia intestinalis L1-82
Position: -95
Score: 5.85257
Sequence: ACACAATATATTGTAT
Locus tag: ROSINTL182_03097
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: ROSINTL182_03098
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
nrdD-nrdD -95 5.9 ACACAATATATTGTAT ROSINTL182_03097
Ruminococcus lactaris ATCC 29176
Position: 19
Score: 5.52515
Sequence: ATACTATATTTTGTAT
Position: 48
Score: 4.12511
Sequence: AGACAATATCTTGAAA
Locus tag: RUMLAC_00868
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: RUMLAC_00869
Name: nrdG
Funciton: anaerobic ribonucleoside-triphosphate reductase activating protein
nrdD-nrdG 19 5.5 ATACTATATTTTGTAT RUMLAC_00868
48 4.1 AGACAATATCTTGAAA
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