Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing nrdF gene

Properties
Regulog: NrdR - Clostridia-3
Regulator type: Transcription factor
Regulator family: NrdR
Regulation mode: repressor
Biological process: Deoxyribonucleotide biosynthesis
Effector: Deoxyribonucleotides
Phylum: Firmicutes
Built upon 49 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Blautia hansenii DSM 20583
Position: -41
Score: 5.42914
Sequence: ATACAAGATATAGTAT
Locus tag: BLAHAN_01704
Name: nrdE
Funciton: Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: BLAHAN_01705
Name: nrdF
Funciton: Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
nrdE-nrdF -41 5.4 ATACAAGATATAGTAT BLAHAN_01704
Clostridium nexile DSM 1787
Position: -60
Score: 5.07322
Sequence: CAACTATATATTGTGG
Position: -28
Score: 4.98436
Sequence: ATACTATAAATAGTAA
Locus tag: CLONEX_03145
Name: nrdE
Funciton: Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: CLONEX_03144
Name: nrdF
Funciton: Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
nrdE-nrdF -60 5.1 CAACTATATATTGTGG CLONEX_03145
-28 5 ATACTATAAATAGTAA
Clostridium scindens ATCC 35704
Position: -64
Score: 5.06548
Sequence: CAACAATATATTGTGG
Position: -33
Score: 4.43605
Sequence: AATCAATAAATTGTAT
Locus tag: CLOSCI_02889
Name: nrdE
Funciton: Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: CLOSCI_02888
Name: nrdF
Funciton: Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
nrdE-nrdF -64 5.1 CAACAATATATTGTGG CLOSCI_02889
-33 4.4 AATCAATAAATTGTAT
Ruminococcus gnavus ATCC 29149
Position: -78
Score: 4.80932
Sequence: ATCCAATATCTTGTGT
Position: -48
Score: 5.27176
Sequence: CCACTATATTTTGTAT
Locus tag: RUMGNA_02624
Name: nrdE
Funciton: Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: RUMGNA_02625
Name: nrdF
Funciton: Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
nrdE-nrdF -78 4.8 ATCCAATATCTTGTGT RUMGNA_02624
-48 5.3 CCACTATATTTTGTAT