Orthologous regulated operons containing COG388 gene
| Regulog: | YrdX - Comamonadaceae |
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | |
| Effector: | |
| Phylum: | Proteobacteria/Beta |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Methylibium petroleiphilum PM1 | ||||
|
Position: -271
Score: 7.1319 Sequence: GTTGATCG-(5)-ATTGATCG
Position: -139
Score: 7.23988 Sequence: CTTGATCG-(3)-ATTGATCG
Position: -92
Score: 4.82266 Sequence: GTGGCACA-(3)-CGTGCAAA
Locus tag: Mpe_A3479
Name: PF02635 Funciton: probable GTP cyclohydrolase II/ATPase/Sulphur relay, DsrE/F-like protein
Locus tag: Mpe_A3478
Name: COG388 Funciton: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (EC 3.5.5.7)
Locus tag: Mpe_A3477
Name: COG2516 Funciton: Biotin synthase-related radical SAM domain protein
Locus tag: Mpe_A3476
Name: COG3153 Funciton: GCN5-related N-acetyltransferase
Locus tag: Mpe_A3475
Name: COG2144 Funciton: AIR synthase related protein/Selenophosphate synthetase-related |
||||
| PF02635-COG388-COG2516-COG3153-COG2144 | -271 | 7.1 | GTTGATCG-(5)-ATTGATCG | Mpe_A3479 |
| -139 | 7.2 | CTTGATCG-(3)-ATTGATCG | ||
| -92 | 4.8 | GTGGCACA-(3)-CGTGCAAA | ||
| Polaromonas naphthalenivorans CJ2 | ||||
|
Position: -324
Score: 6.59385 Sequence: CTTGATTG-(5)-CTTGATTG
Position: -320
Score: 5.06978 Sequence: ATTGCATG-(5)-ATTGCATT
Position: -224
Score: 6.12774 Sequence: GTTTATCG-(5)-ATTGATTG
Position: -105
Score: 6.59385 Sequence: ATTGATTG-(3)-CTTGATTG
Locus tag: Pnap_2105
Name: PF02635 Funciton: probable GTP cyclohydrolase II/ATPase/Sulphur relay, DsrE/F-like protein
Locus tag: Pnap_2104
Name: COG388 Funciton: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (EC 3.5.5.7)
Locus tag: Pnap_2103
Name: COG2516 Funciton: Biotin synthase-related radical SAM domain protein
Locus tag: Pnap_2102
Name: COG3153 Funciton: GCN5-related N-acetyltransferase
Locus tag: Pnap_2101
Name: COG2144 Funciton: AIR synthase related protein/Selenophosphate synthetase-related
Locus tag: Pnap_2100
Name: COG438 (RfaG) Funciton: Glycosyltransferase |
||||
| PF02635-COG388-COG2516-COG3153-COG2144-COG438 (RfaG) | -324 | 6.6 | CTTGATTG-(5)-CTTGATTG | Pnap_2105 |
| -320 | 5.1 | ATTGCATG-(5)-ATTGCATT | ||
| -224 | 6.1 | GTTTATCG-(5)-ATTGATTG | ||
| -105 | 6.6 | ATTGATTG-(3)-CTTGATTG | ||
| Variovorax paradoxus S110 | ||||
|
Position: -343
Score: 6.80888 Sequence: GTTGATCG-(5)-ATTGATTG
Position: -242
Score: 7.1319 Sequence: GTTGATCG-(5)-ATTGATCG
Position: -111
Score: 7.23988 Sequence: ATTGATCG-(3)-ATTGATCG
Position: -74
Score: 4.93064 Sequence: CTGGCACA-(3)-CCTGCAAA
Locus tag: Vapar_0562
Name: PF02635 Funciton: probable GTP cyclohydrolase II/ATPase/Sulphur relay, DsrE/F-like protein
Locus tag: Vapar_0561
Name: COG388 Funciton: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (EC 3.5.5.7)
Locus tag: Vapar_0560
Name: COG2516 Funciton: Biotin synthase-related radical SAM domain protein
Locus tag: Vapar_0559
Name: COG3153 Funciton: GCN5-related N-acetyltransferase
Locus tag: Vapar_0558
Name: COG2144 Funciton: AIR synthase related protein/Selenophosphate synthetase-related
Locus tag: Vapar_0557
Name: null Funciton: hypothetical protein
Locus tag: Vapar_0556
Name: COG2072 (TrkA) Funciton: FAD dependent oxidoreductase |
||||
| PF02635-COG388-COG2516-COG3153-COG2144-Vapar_0557-COG2072 (TrkA) | -343 | 6.8 | GTTGATCG-(5)-ATTGATTG | Vapar_0562 |
| -242 | 7.1 | GTTGATCG-(5)-ATTGATCG | ||
| -111 | 7.2 | ATTGATCG-(3)-ATTGATCG | ||
| -74 | 4.9 | CTGGCACA-(3)-CCTGCAAA | ||