Orthologous regulated operons containing PF05484 gene

Properties
Regulog:	NifA - Rhizobiales
Regulator type:	Transcription factor
Regulator family:	Fis
Regulation mode:	activator
Biological process:	Nitrogen fixation
Effector:
Phylum:	Proteobacteria/alpha

Built upon 130 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Azorhizobium caulinodans ORS 571
Position: -138 Score: 5.06497 Sequence: TGTTGGCAACGCGACA Locus tag: AZC_3414 Name: nifB Funciton: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB Locus tag: AZC_3415 Name: frxA Funciton: 2(4Fe-4S) ferredoxin in Nif regulon, iron-sulfur compound bisynthesis Locus tag: AZC_3416 Name: hesB Funciton: probable iron binding protein from the HesB_IscA_SufA family in Nif operon Locus tag: AZC_3417 Name: RPA4627 Funciton: Conserved hypothetical protein, associated with nitrogen fixation genes Locus tag: AZC_3418 Name: PF05484 Funciton: LRV (FeS)4 cluster domain protein clustered with nitrogenase cofactor synthesis Locus tag: AZC_3419 Name: nifZ Funciton: Nitrogen fixation protein NifZ Locus tag: AZC_3420 Name: nifZ Funciton: Nitrogen fixation protein NifZ
nifB-frxA-hesB-RPA4627-PF05484-nifZ-nifZ	-138	5.1	TGTTGGCAACGCGACA	AZC_3414
Bradyrhizobium sp. BTAi1
Position: -141 Score: 5.03782 Sequence: TGTTGGCAAGGCGACA Locus tag: BBta_5904 Name: nifB Funciton: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB Locus tag: BBta_5903 Name: frxA Funciton: 2(4Fe-4S) ferredoxin in Nif regulon, iron-sulfur compound bisynthesis Locus tag: BBta_5902 Name: hesB Funciton: probable iron binding protein from the HesB_IscA_SufA family in Nif operon Locus tag: BBta_5901 Name: RPA4627 Funciton: Conserved hypothetical protein, associated with nitrogen fixation genes Locus tag: BBta_5900 Name: PF05484 Funciton: LRV (FeS)4 cluster domain protein clustered with nitrogenase cofactor synthesis Locus tag: BBta_5899 Name: nifZ Funciton: Nitrogen fixation protein NifZ Locus tag: BBta_5898 Name: nifZ Funciton: Nitrogen fixation protein NifZ
nifB-frxA-hesB-RPA4627-PF05484-nifZ-nifZ	-141	5	TGTTGGCAAGGCGACA	BBta_5904
Rhodopseudomonas palustris CGA009
Position: -147 Score: 5.07993 Sequence: TGTCAGACTTGCGACA Position: -129 Score: 4.27653 Sequence: TGTCGGGGGCCTTACA Locus tag: RPA4631 Name: fdxN Funciton: 4Fe-4S ferredoxin, nitrogenase-associated Locus tag: RPA4630 Name: nifB Funciton: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB Locus tag: RPA4629 Name: frxA Funciton: 2(4Fe-4S) ferredoxin in Nif regulon, iron-sulfur compound bisynthesis Locus tag: RPA4628 Name: hesB Funciton: probable iron binding protein from the HesB_IscA_SufA family in Nif operon Locus tag: RPA4627 Name: RPA4627 Funciton: Conserved hypothetical protein, associated with nitrogen fixation genes Locus tag: RPA4626 Name: PF05484 Funciton: LRV (FeS)4 cluster domain protein clustered with nitrogenase cofactor synthesis Locus tag: RPA4625 Name: nifZ Funciton: Nitrogen fixation protein NifZ Locus tag: RPA4624 Name: nifZ Funciton: Nitrogen fixation protein NifZ Locus tag: RPA4623 Name: nifT Funciton: Nitrogen fixation protein NifT
fdxN-nifB-frxA-hesB-RPA4627-PF05484-nifZ-nifZ-nifT	-147	5.1	TGTCAGACTTGCGACA	RPA4631
	-129	4.3	TGTCGGGGGCCTTACA
Xanthobacter autotrophicus Py2
Position: -284 Score: 4.05432 Sequence: TGTCCCCGTGGGGACA Position: -141 Score: 4.20195 Sequence: TGTTGTTAAGCCGACA Locus tag: Xaut_0111 Name: nifB Funciton: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB Locus tag: Xaut_0112 Name: frxA Funciton: 2(4Fe-4S) ferredoxin in Nif regulon, iron-sulfur compound bisynthesis Locus tag: Xaut_0113 Name: hesB Funciton: probable iron binding protein from the HesB_IscA_SufA family in Nif operon Locus tag: Xaut_0114 Name: RPA4627 Funciton: Conserved hypothetical protein, associated with nitrogen fixation genes Locus tag: Xaut_0115 Name: PF05484 Funciton: LRV (FeS)4 cluster domain protein clustered with nitrogenase cofactor synthesis Locus tag: Xaut_0116 Name: nifZ Funciton: Nitrogen fixation protein NifZ Locus tag: Xaut_0117 Name: nifZ Funciton: Nitrogen fixation protein NifZ
nifB-frxA-hesB-RPA4627-PF05484-nifZ-nifZ	-284	4.1	TGTCCCCGTGGGGACA	Xaut_0111
	-141	4.2	TGTTGTTAAGCCGACA