Orthologous regulated operons containing nifB gene
| Regulog: | NifA - Rhizobiales |
| Regulator type: | Transcription factor |
| Regulator family: | Fis |
| Regulation mode: | activator |
| Biological process: | Nitrogen fixation |
| Effector: | |
| Phylum: | Proteobacteria/alpha |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Azorhizobium caulinodans ORS 571 | ||||
|
Position: -138
Score: 5.06497 Sequence: TGTTGGCAACGCGACA
Locus tag: AZC_3414
Name: nifB Funciton: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB
Locus tag: AZC_3415
Name: frxA Funciton: 2(4Fe-4S) ferredoxin in Nif regulon, iron-sulfur compound bisynthesis
Locus tag: AZC_3416
Name: hesB Funciton: probable iron binding protein from the HesB_IscA_SufA family in Nif operon
Locus tag: AZC_3417
Name: RPA4627 Funciton: Conserved hypothetical protein, associated with nitrogen fixation genes
Locus tag: AZC_3418
Name: PF05484 Funciton: LRV (FeS)4 cluster domain protein clustered with nitrogenase cofactor synthesis
Locus tag: AZC_3419
Name: nifZ Funciton: Nitrogen fixation protein NifZ
Locus tag: AZC_3420
Name: nifZ Funciton: Nitrogen fixation protein NifZ |
||||
| nifB-frxA-hesB-RPA4627-PF05484-nifZ-nifZ | -138 | 5.1 | TGTTGGCAACGCGACA | AZC_3414 |
| Bradyrhizobium sp. BTAi1 | ||||
|
Position: -141
Score: 5.03782 Sequence: TGTTGGCAAGGCGACA
Locus tag: BBta_5904
Name: nifB Funciton: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB
Locus tag: BBta_5903
Name: frxA Funciton: 2(4Fe-4S) ferredoxin in Nif regulon, iron-sulfur compound bisynthesis
Locus tag: BBta_5902
Name: hesB Funciton: probable iron binding protein from the HesB_IscA_SufA family in Nif operon
Locus tag: BBta_5901
Name: RPA4627 Funciton: Conserved hypothetical protein, associated with nitrogen fixation genes
Locus tag: BBta_5900
Name: PF05484 Funciton: LRV (FeS)4 cluster domain protein clustered with nitrogenase cofactor synthesis
Locus tag: BBta_5899
Name: nifZ Funciton: Nitrogen fixation protein NifZ
Locus tag: BBta_5898
Name: nifZ Funciton: Nitrogen fixation protein NifZ |
||||
| nifB-frxA-hesB-RPA4627-PF05484-nifZ-nifZ | -141 | 5 | TGTTGGCAAGGCGACA | BBta_5904 |
| Mesorhizobium loti MAFF303099 | ||||
|
Position: -156
Score: 5.07171 Sequence: TGTCGGCGACCTGACA
Locus tag: mll5855
Name: nifB Funciton: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB
Locus tag: msl8750
Name: fdxN Funciton: 4Fe-4S ferredoxin, nitrogenase-associated
Locus tag: mll5854
Name: nifZ Funciton: Nitrogen fixation protein NifZ
Locus tag: msl5852
Name: nifT Funciton: Nitrogen fixation protein NifT |
||||
| nifB-fdxN-nifZ-nifT | -156 | 5.1 | TGTCGGCGACCTGACA | mll5855 |
| Rhizobium etli CFN 42 | ||||
|
Position: -139
Score: 4.76552 Sequence: TGTCGGAAGCTTGACA
Locus tag: RHE_PD00229
Name: nifB Funciton: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB
Locus tag: RHE_PD00230
Name: fdxN Funciton: 4Fe-4S ferredoxin, nitrogenase-associated |
||||
| nifB-fdxN | -139 | 4.8 | TGTCGGAAGCTTGACA | RHE_PD00229 |
| Rhizobium leguminosarum bv. viciae 3841 | ||||
|
Position: -148
Score: 4.89893 Sequence: TGTCGGCAACCCTACA
Locus tag: pRL100200
Name: fixB Funciton: Electron transfer flavoprotein, beta subunit
Locus tag: pRL100199
Name: fixA Funciton: Electron transfer flavoprotein, alpha subunit
Locus tag: pRL100198
Name: fixC Funciton: Electron-transferring-flavoprotein dehydrogenase
Locus tag: pRL100197
Name: fixX Funciton: Ferredoxin-like protein, FixX
Locus tag: pRL100196
Name: nifA Funciton: Nitrogen fixation transcriptional regulator NifA, Fis family
Locus tag: pRL100195
Name: nifB Funciton: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB |
||||
| fixB-fixA-fixC-fixX-nifA-nifB | -148 | 4.9 | TGTCGGCAACCCTACA | pRL100200 |
| Rhizobium sp. NGR234 | ||||
|
Position: -144
Score: 5.23209 Sequence: TGTCGCGAATTCGACA
Locus tag: NGR_a01270
Name: nifB Funciton: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB
Locus tag: NGR_a01280
Name: fdxN Funciton: 4Fe-4S ferredoxin, nitrogenase-associated
Locus tag: NGR_a01290
Name: nifZ Funciton: Nitrogen fixation protein NifZ
Locus tag: NGR_a01300
Name: nifT Funciton: Nitrogen fixation protein NifT |
||||
| nifB-fdxN-nifZ-nifT | -144 | 5.2 | TGTCGCGAATTCGACA | NGR_a01270 |
| Rhodopseudomonas palustris CGA009 | ||||
|
Position: -147
Score: 5.07993 Sequence: TGTCAGACTTGCGACA
Position: -129
Score: 4.27653 Sequence: TGTCGGGGGCCTTACA
Locus tag: RPA4631
Name: fdxN Funciton: 4Fe-4S ferredoxin, nitrogenase-associated
Locus tag: RPA4630
Name: nifB Funciton: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB
Locus tag: RPA4629
Name: frxA Funciton: 2(4Fe-4S) ferredoxin in Nif regulon, iron-sulfur compound bisynthesis
Locus tag: RPA4628
Name: hesB Funciton: probable iron binding protein from the HesB_IscA_SufA family in Nif operon
Locus tag: RPA4627
Name: RPA4627 Funciton: Conserved hypothetical protein, associated with nitrogen fixation genes
Locus tag: RPA4626
Name: PF05484 Funciton: LRV (FeS)4 cluster domain protein clustered with nitrogenase cofactor synthesis
Locus tag: RPA4625
Name: nifZ Funciton: Nitrogen fixation protein NifZ
Locus tag: RPA4624
Name: nifZ Funciton: Nitrogen fixation protein NifZ
Locus tag: RPA4623
Name: nifT Funciton: Nitrogen fixation protein NifT |
||||
| fdxN-nifB-frxA-hesB-RPA4627-PF05484-nifZ-nifZ-nifT | -147 | 5.1 | TGTCAGACTTGCGACA | RPA4631 |
| -129 | 4.3 | TGTCGGGGGCCTTACA | ||
| Sinorhizobium meliloti 1021 | ||||
|
Position: -130
Score: 5.42176 Sequence: TGTCGGAAGTCCGACA
Locus tag: SMa0814
Name: nifB Funciton: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB
Locus tag: SMa0811
Name: fdxN Funciton: 4Fe-4S ferredoxin, nitrogenase-associated
Locus tag: SMa0810
Name: nifT Funciton: Nitrogen fixation protein NifT |
||||
| nifB-fdxN-nifT | -130 | 5.4 | TGTCGGAAGTCCGACA | SMa0814 |
| Xanthobacter autotrophicus Py2 | ||||
|
Position: -284
Score: 4.05432 Sequence: TGTCCCCGTGGGGACA
Position: -141
Score: 4.20195 Sequence: TGTTGTTAAGCCGACA
Locus tag: Xaut_0111
Name: nifB Funciton: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB
Locus tag: Xaut_0112
Name: frxA Funciton: 2(4Fe-4S) ferredoxin in Nif regulon, iron-sulfur compound bisynthesis
Locus tag: Xaut_0113
Name: hesB Funciton: probable iron binding protein from the HesB_IscA_SufA family in Nif operon
Locus tag: Xaut_0114
Name: RPA4627 Funciton: Conserved hypothetical protein, associated with nitrogen fixation genes
Locus tag: Xaut_0115
Name: PF05484 Funciton: LRV (FeS)4 cluster domain protein clustered with nitrogenase cofactor synthesis
Locus tag: Xaut_0116
Name: nifZ Funciton: Nitrogen fixation protein NifZ
Locus tag: Xaut_0117
Name: nifZ Funciton: Nitrogen fixation protein NifZ |
||||
| nifB-frxA-hesB-RPA4627-PF05484-nifZ-nifZ | -284 | 4.1 | TGTCCCCGTGGGGACA | Xaut_0111 |
| -141 | 4.2 | TGTTGTTAAGCCGACA | ||