Orthologous regulated operons containing nifB gene

Properties
Regulog:	NifA - Rhodospirillales
Regulator type:	Transcription factor
Regulator family:	Fis
Regulation mode:	activator
Biological process:	Nitrogen fixation
Effector:
Phylum:	Proteobacteria/alpha

Built upon 54 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Azospirillum sp. B510
Position: -190 Score: 5.27821 Sequence: TGTCGGCACCCCGACA Position: -139 Score: 4.4313 Sequence: TGTCACAATGACGACA Locus tag: AZL_022470 Name: nifB Funciton: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB Locus tag: AZL_022480 Name: fdxN Funciton: 4Fe-4S ferredoxin, nitrogenase-associated Locus tag: AZL_022490 Name: AZL_022490 Funciton: Hypothetical protein Locus tag: AZL_022500 Name: PF01816 Funciton: Leucine-rich FeS4 cluster domain protein Locus tag: AZL_022510 Name: nifZ Funciton: Nitrogen fixation protein NifZ Locus tag: AZL_022520 Name: nifZ Funciton: Nitrogen fixation protein NifZ Locus tag: AZL_022530 Name: nifS2 Funciton: Cysteine desulfurase (EC 2.8.1.7), NifS subfamily Locus tag: AZL_022540 Name: nifT Funciton: Nitrogen fixation protein nifT
nifB-fdxN-AZL_022490-PF01816-nifZ-nifZ-nifS2-nifT	-190	5.3	TGTCGGCACCCCGACA	AZL_022470
	-139	4.4	TGTCACAATGACGACA
Gluconacetobacter diazotrophicus PAl 5
Position: -120 Score: 4.80076 Sequence: TGTCGGACATGAGACA Locus tag: Gdia_1576 Name: nifB Funciton: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB Locus tag: Gdia_1575 Name: fdxN Funciton: 4Fe-4S ferredoxin, nitrogenase-associated Locus tag: Gdia_1574 Name: PF01816 Funciton: Leucine-rich FeS4 cluster domain protein Locus tag: Gdia_1573 Name: nifZ Funciton: Nitrogen fixation protein NifZ Locus tag: Gdia_1572 Name: nifT Funciton: Nitrogen fixation protein nifT Locus tag: Gdia_1571 Name: sir2 Funciton: Conserved hypothetical protein
nifB-fdxN-PF01816-nifZ-nifT-sir2	-120	4.8	TGTCGGACATGAGACA	Gdia_1576
Magnetospirillum magneticum AMB-1
Position: -135 Score: 4.87724 Sequence: TGTCGCGTCCCCGACC Position: -115 Score: 5.49472 Sequence: TGTCGGGGATGCGACA Locus tag: amb1583 Name: nifB Funciton: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB Locus tag: amb1582 Name: nifZ Funciton: Nitrogen fixation protein NifZ Locus tag: amb1581 Name: nifT Funciton: Nitrogen fixation protein nifT Locus tag: amb1580 Name: sir2 Funciton: Conserved hypothetical protein
nifB-nifZ-nifT-sir2	-135	4.9	TGTCGCGTCCCCGACC	amb1583
	-115	5.5	TGTCGGGGATGCGACA
Magnetospirillum magnetotacticum MS-1
Position: -135 Score: 4.36909 Sequence: TGTCGCATCCCCGCCC Position: -116 Score: 5.49472 Sequence: TGTCGGGGATGCGACA Locus tag: Magn03009032 Name: nifB Funciton: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB Locus tag: Magn03009031 Name: fdxN Funciton: 4Fe-4S ferredoxin, nitrogenase-associated Locus tag: Magn03009030 Name: nifZ Funciton: Nitrogen fixation protein NifZ Locus tag: Magn03009029 Name: nifT Funciton: Nitrogen fixation protein nifT Locus tag: Magn03009028 Name: sir2 Funciton: Conserved hypothetical protein
nifB-fdxN-nifZ-nifT-sir2	-135	4.4	TGTCGCATCCCCGCCC	Magn03009032
	-116	5.5	TGTCGGGGATGCGACA
Rhodospirillum centenum SW
Position: -157 Score: 5.11512 Sequence: TGTCGGCTTCCCCACA Position: -134 Score: 5.49472 Sequence: TGTCGCATCCCCGACA Locus tag: RC1_3690 Name: nifB Funciton: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB Locus tag: RC1_3689 Name: fdxN Funciton: 4Fe-4S ferredoxin, nitrogenase-associated Locus tag: RC1_3688 Name: nifZ Funciton: Nitrogen fixation protein NifZ Locus tag: RC1_3687 Name: nifT Funciton: Nitrogen fixation protein nifT Locus tag: RC1_3686 Name: sir2 Funciton: Conserved hypothetical protein
nifB-fdxN-nifZ-nifT-sir2	-157	5.1	TGTCGGCTTCCCCACA	RC1_3690
	-134	5.5	TGTCGCATCCCCGACA
Rhodospirillum rubrum ATCC 11170
Position: -169 Score: 4.16267 Sequence: TGTCGATATCCCGACC Position: -130 Score: 4.01944 Sequence: TGTCGTAGACTCTACA Locus tag: Rru_A0994 Name: nifB Funciton: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB Locus tag: Rru_A0995 Name: fdxN Funciton: 4Fe-4S ferredoxin, nitrogenase-associated Locus tag: Rru_A0996 Name: PF01816 Funciton: Leucine-rich FeS4 cluster domain protein Locus tag: Rru_A0997 Name: nifZ Funciton: Nitrogen fixation protein NifZ Locus tag: Rru_A0998 Name: nifT Funciton: Nitrogen fixation protein nifT Locus tag: Rru_A0999 Name: sir2 Funciton: Conserved hypothetical protein
nifB-fdxN-PF01816-nifZ-nifT-sir2	-169	4.2	TGTCGATATCCCGACC	Rru_A0994
	-130	4	TGTCGTAGACTCTACA

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Orthologous regulated operons containing nifB gene

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --