Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing nifE gene

Properties
Regulog: NifA - Rhodospirillales
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator
Biological process: Nitrogen fixation
Effector:
Phylum: Proteobacteria/alpha
Built upon 54 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Azospirillum sp. B510
Position: -150
Score: 4.36457
Sequence: TGTGCGATACCCTACA
Position: -123
Score: 4.98693
Sequence: TGTCGGGTATCGCACA
Locus tag: AZL_007660
Name: nifE
Funciton: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE
Locus tag: AZL_007650
Name: nifN
Funciton: Nitrogenase FeMo-cofactor scaffold and assembly protein NifN
Locus tag: AZL_007640
Name: nifX
Funciton: Nitrogenase FeMo-cofactor carrier protein NifX
Locus tag: AZL_007630
Name: PF03270
Funciton: Conserved hypothetical protein, probably related to nitrogen fixation protein
Locus tag: AZL_007620
Name: PF05082
Funciton: Conserved hypothetical protein, probably related to nitrogen fixation protein
Locus tag: AZL_007610
Name: fdxB
Funciton: Nitrogenase specific ferredoxin III protein FdxB
nifE-nifN-nifX-PF03270-PF05082-fdxB -150 4.4 TGTGCGATACCCTACA AZL_007660
-123 5 TGTCGGGTATCGCACA
Gluconacetobacter diazotrophicus PAl 5
Position: -156
Score: 3.966
Sequence: TGTCAGGCTTCGCACA
Locus tag: Gdia_1570
Name: nifH
Funciton: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH
Locus tag: Gdia_1569
Name: nifD
Funciton: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1)
Locus tag: Gdia_1568
Name: nifK
Funciton: Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1)
Locus tag: Gdia_1567
Name: nifE
Funciton: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE
Locus tag: Gdia_1566
Name: nifN
Funciton: Nitrogenase FeMo-cofactor scaffold and assembly protein NifN
Locus tag: Gdia_1565
Name: nifX
Funciton: Nitrogenase FeMo-cofactor carrier protein NifX
Locus tag: Gdia_1564
Name: PF03270
Funciton: Conserved hypothetical protein, probably related to nitrogen fixation protein
Locus tag: Gdia_1563
Name: PF05082
Funciton: Conserved hypothetical protein, probably related to nitrogen fixation protein
Locus tag: Gdia_1562
Name: fdxB
Funciton: Nitrogenase specific ferredoxin III protein FdxB
Locus tag: Gdia_1561
Name: nifQ
Funciton: Nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ
nifH-nifD-nifK-nifE-nifN-nifX-PF03270-PF05082-fdxB-nifQ -156 4 TGTCAGGCTTCGCACA Gdia_1570
Magnetospirillum magneticum AMB-1
Position: -118
Score: 5.37082
Sequence: TGTCGCATGTCCGACA
Locus tag: amb1569
Name: nifE
Funciton: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE
Locus tag: amb1568
Name: nifN
Funciton: Nitrogenase FeMo-cofactor scaffold and assembly protein NifN
Locus tag: amb1567
Name: nifX
Funciton: Nitrogenase FeMo-cofactor carrier protein NifX
Locus tag: amb1566
Name: PF03270
Funciton: Conserved hypothetical protein, probably related to nitrogen fixation protein
Locus tag: amb1565
Name: fdxB
Funciton: Nitrogenase specific ferredoxin III protein FdxB
Locus tag: amb1564
Name: nifQ
Funciton: Nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ
nifE-nifN-nifX-PF03270-fdxB-nifQ -118 5.4 TGTCGCATGTCCGACA amb1569
Magnetospirillum magnetotacticum MS-1
Position: -118
Score: 5.49472
Sequence: TGTCGCATCCCCGACA
Locus tag: Magn03009017
Name: nifE
Funciton: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE
Locus tag: Magn03009016
Name: nifN
Funciton: Nitrogenase FeMo-cofactor scaffold and assembly protein NifN
Locus tag: Magn03009015
Name: nifX
Funciton: Nitrogenase FeMo-cofactor carrier protein NifX
Locus tag: Magn03009014
Name: PF03270
Funciton: Conserved hypothetical protein, probably related to nitrogen fixation protein
Locus tag: Magn03009013
Name: fdxB
Funciton: Nitrogenase specific ferredoxin III protein FdxB
Locus tag: Magn03009012
Name: nifQ
Funciton: Nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ
nifE-nifN-nifX-PF03270-fdxB-nifQ -118 5.5 TGTCGCATCCCCGACA Magn03009017
Rhodospirillum centenum SW
Position: -192
Score: 5.61585
Sequence: TGTCGCGTTTGCGACA
Locus tag: RC1_3683
Name: nifH
Funciton: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH
Locus tag: RC1_3682
Name: nifD
Funciton: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1)
Locus tag: RC1_3681
Name: nifK
Funciton: Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1)
Locus tag: RC1_3680
Name: nifE
Funciton: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE
Locus tag: RC1_3679
Name: nifX
Funciton: Nitrogenase FeMo-cofactor carrier protein NifX
Locus tag: RC1_3678
Name: PF03270
Funciton: Conserved hypothetical protein, probably related to nitrogen fixation protein
Locus tag: RC1_3677
Name: PF05082
Funciton: Conserved hypothetical protein, probably related to nitrogen fixation protein
nifH-nifD-nifK-nifE-nifX-PF03270-PF05082 -192 5.6 TGTCGCGTTTGCGACA RC1_3683
Rhodospirillum rubrum ATCC 11170
Position: -217
Score: 4.37345
Sequence: TGTCCGGCTTGCGCCA
Position: -175
Score: 5.36625
Sequence: TGTCGTAAACCCGACA
Locus tag: Rru_A2286
Name: nifE
Funciton: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE
Locus tag: Rru_A2285
Name: nifN
Funciton: Nitrogenase FeMo-cofactor scaffold and assembly protein NifN
Locus tag: Rru_A2284
Name: nifX
Funciton: Nitrogenase FeMo-cofactor carrier protein NifX
Locus tag: Rru_A2283
Name: PF03270
Funciton: Conserved hypothetical protein, probably related to nitrogen fixation protein
Locus tag: Rru_A2282
Name: fdxB
Funciton: Nitrogenase specific ferredoxin III protein FdxB
Locus tag: Rru_A2281
Name: nifQ
Funciton: Nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ
nifE-nifN-nifX-PF03270-fdxB-nifQ -217 4.4 TGTCCGGCTTGCGCCA Rru_A2286
-175 5.4 TGTCGTAAACCCGACA
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