Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing nifW gene

Properties
Regulog: NifA - Rhodospirillales
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator
Biological process: Nitrogen fixation
Effector:
Phylum: Proteobacteria/alpha
Built upon 54 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Azospirillum sp. B510
Position: -188
Score: 5.23964
Sequence: TGTCGCAAAAGCGACA
Locus tag: AZL_006570
Name: iscN
Funciton: Fe-S cofactor nitrogenase synthesis protein IscN
Locus tag: AZL_006560
Name: nifU
Funciton: Iron-sulfur cluster assembly scaffold protein NifU
Locus tag: AZL_006550
Name: nifS
Funciton: Cysteine desulfurase (EC 2.8.1.7), NifS subfamily
Locus tag: AZL_006540
Name: nifV
Funciton: Homocitrate synthase (EC 2.3.3.14)
Locus tag: AZL_006530
Name: nifP
Funciton: Serine O-acetyltransferase (EC 2.3.1.30)
Locus tag: AZL_006520
Name: nifW
Funciton: Nitrogenase-stabilizing/protective protein nifW
iscN-nifU-nifS-nifV-nifP-nifW -188 5.2 TGTCGCAAAAGCGACA AZL_006570
Gluconacetobacter diazotrophicus PAl 5
Position: -132
Score: 5.0772
Sequence: CGTCGGGAATCCGACA
Position: -115
Score: 4.23744
Sequence: CGTTGCAAATCGGACA
Locus tag: Gdia_1560
Name: iscN
Funciton: Fe-S cofactor nitrogenase synthesis protein IscN
Locus tag: Gdia_1559
Name: nifU
Funciton: Iron-sulfur cluster assembly scaffold protein NifU
Locus tag: Gdia_1558
Name: nifS
Funciton: Cysteine desulfurase (EC 2.8.1.7), NifS subfamily
Locus tag: Gdia_1557
Name: nifV
Funciton: Homocitrate synthase (EC 2.3.3.14)
Locus tag: Gdia_1556
Name: nifW
Funciton: Nitrogenase-stabilizing/protective protein nifW
iscN-nifU-nifS-nifV-nifW -132 5.1 CGTCGGGAATCCGACA Gdia_1560
-115 4.2 CGTTGCAAATCGGACA
Magnetospirillum magneticum AMB-1
Position: -127
Score: 4.90993
Sequence: TGTCGCAAAGTCGACA
Position: -110
Score: 4.02074
Sequence: TGTCGGATTCCCCTCC
Locus tag: amb1563
Name: iscN
Funciton: Fe-S cofactor nitrogenase synthesis protein IscN
Locus tag: amb1562
Name: nifV
Funciton: Homocitrate synthase (EC 2.3.3.14)
Locus tag: amb1561
Name: nifW
Funciton: Nitrogenase-stabilizing/protective protein nifW
iscN-nifV-nifW -127 4.9 TGTCGCAAAGTCGACA amb1563
-110 4 TGTCGGATTCCCCTCC
Magnetospirillum magnetotacticum MS-1
Position: -126
Score: 5.29644
Sequence: TGTCGCAAAACCGACA
Locus tag: Magn03009011
Name: iscN
Funciton: Fe-S cofactor nitrogenase synthesis protein IscN
Locus tag: Magn03009010
Name: nifV
Funciton: Homocitrate synthase (EC 2.3.3.14)
Locus tag: Magn03009009
Name: nifW
Funciton: Nitrogenase-stabilizing/protective protein nifW
iscN-nifV-nifW -126 5.3 TGTCGCAAAACCGACA Magn03009011
Rhodospirillum centenum SW
Position: -155
Score: 5.30945
Sequence: TGTCGTGAATGCGACA
Position: -119
Score: 5.30945
Sequence: TGTCGCATTCACGACA
Locus tag: RC1_3693
Name: nifV
Funciton: Homocitrate synthase (EC 2.3.3.14)
Locus tag: RC1_3694
Name: nifW
Funciton: Nitrogenase-stabilizing/protective protein nifW
Locus tag: RC1_3695
Name: fixB
Funciton: Electron transfer flavoprotein, beta subunit
Locus tag: RC1_3696
Name: fixA
Funciton: Electron transfer flavoprotein, alpha subunit
Locus tag: RC1_3697
Name: fixC
Funciton: Electron-transferring-flavoprotein dehydrogenase
Locus tag: RC1_3698
Name: fixX
Funciton: Ferredoxin-like protein, FixX
nifV-nifW-fixB-fixA-fixC-fixX -155 5.3 TGTCGTGAATGCGACA RC1_3693
-119 5.3 TGTCGCATTCACGACA
Rhodospirillum rubrum ATCC 11170
Position: -173
Score: 5.51326
Sequence: TGTCGGCTTTCCGACA
Position: -125
Score: 4.91774
Sequence: TGTCGGAAAGGCGCCA
Locus tag: Rru_A2271
Name: iscN
Funciton: Fe-S cofactor nitrogenase synthesis protein IscN
Locus tag: Rru_A2270
Name: iscU
Funciton: Nitrogen fixation protein IscU
Locus tag: Rru_A2269
Name: nifV
Funciton: Homocitrate synthase (EC 2.3.3.14)
Locus tag: Rru_A2268
Name: nifW
Funciton: Nitrogenase-stabilizing/protective protein nifW
Locus tag: Rru_A2267
Name: fixB
Funciton: Electron transfer flavoprotein, beta subunit
Locus tag: Rru_A2266
Name: fixA
Funciton: Electron transfer flavoprotein, alpha subunit
Locus tag: Rru_A2265
Name: fixC
Funciton: Electron-transferring-flavoprotein dehydrogenase
Locus tag: Rru_A2264
Name: fixX
Funciton: Ferredoxin-like protein, FixX
iscN-iscU-nifV-nifW-fixB-fixA-fixC-fixX -173 5.5 TGTCGGCTTTCCGACA Rru_A2271
-125 4.9 TGTCGGAAAGGCGCCA
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