Orthologous regulated operons containing agaK gene
| Regulog: | AgaR - Clostridia-1 |
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | N-acetylgalactosamine utilization |
| Effector: | |
| Phylum: | Firmicutes |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Clostridium beijerincki NCIMB 8052 | ||||
|
Position: -192
Score: 4.81845 Sequence: AAACTGGTAGTATCCAGTTA
Locus tag: Cbei_4539
Name: Cbei_4539 Funciton: Putative transcriptional regulator with PTS regulatory domain
Locus tag: Cbei_4538
Name: Cbei_4538 Funciton: PTS system, cellobiose-specific IIB component (EC 2.7.1.69)
Locus tag: Cbei_4537
Name: Cbei_4537 Funciton: PTS system, lichenan-, cellobiose-specific IIA component (EC 2.7.1.69); PTS system, cellobiose-specific IIC component (EC 2.7.1.69)
Locus tag: Cbei_4536
Name: agaK Funciton: Predicted N-acetylgalactosamine kinase (EC 2.7.1.157)
Locus tag: Cbei_4535
Name: Cbei_4535 Funciton: PTS system, cellobiose-specific IIC component (EC 2.7.1.69) |
||||
| Cbei_4539-Cbei_4538-Cbei_4537-agaK-Cbei_4535 | -192 | 4.8 | AAACTGGTAGTATCCAGTTA | Cbei_4539 |
| Clostridium butyricum 5521 | ||||
|
Position: -267
Score: 5.76517 Sequence: TAAGTGGTAATTACCAAATA
Position: -51
Score: 5.95037 Sequence: TAAGTGGTAATTACCAGTTG
Locus tag: CBY_3029
Name: agaA2 Funciton: N-acetylgalactosamine-6-phosphate deacetylase (EC 3.5.1.25)
Locus tag: CBY_3030
Name: Cbei_4539 Funciton: Putative transcriptional regulator with PTS regulatory domain
Locus tag: CBY_3031
Name: Cbei_4538 Funciton: PTS system, cellobiose-specific IIB component (EC 2.7.1.69)
Locus tag: CBY_3032
Name: Cbei_4537 Funciton: PTS system, lichenan-, cellobiose-specific IIA component (EC 2.7.1.69); PTS system, cellobiose-specific IIC component (EC 2.7.1.69)
Locus tag: CBY_3033
Name: agaK Funciton: Predicted N-acetylgalactosamine kinase (EC 2.7.1.157)
Locus tag: CBY_3034
Name: PF05913 Funciton: Bacterial protein of unknown function (DUF871)
Locus tag: CBY_3035
Name: Cbei_4535 Funciton: PTS system, cellobiose-specific IIC component (EC 2.7.1.69) |
||||
| agaA2-Cbei_4539-Cbei_4538-Cbei_4537-agaK-PF05913-Cbei_4535 | -267 | 5.8 | TAAGTGGTAATTACCAAATA | CBY_3029 |
| -51 | 6 | TAAGTGGTAATTACCAGTTG | ||