Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing sdhC gene

Properties
Regulog: SdhR - Burkholderia
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process: Tricarboxylic acid cycle
Effector:
Phylum: Proteobacteria/Beta
Built upon 34 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Burkholderia cepacia AMMD
Position: -69
Score: 7.3786
Sequence: TCATATGTCTTATATAAGACAGATGT
Locus tag: Bamb_3310
Name: sdhR
Funciton: Transcriptional regulator of TCA cycle, GntR family
Locus tag: Bamb_3311
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Bamb_3312
Name: sdhD
Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Bamb_3313
Name: sdhA
Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Bamb_3314
Name: sdhB
Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Bamb_3315
Name: COG2938
Funciton: succinate dehydrogenase iron-sulfur subunit
Locus tag: Bamb_3316
Name: gltA
Funciton: Citrate synthase (si) (EC 2.3.3.1)
sdhR-sdhC-sdhD-sdhA-sdhB-COG2938-gltA -69 7.4 TCATATGTCTTATATAAGACAGATGT Bamb_3310
Burkholderia glumae BGR1
Position: -69
Score: 7.3786
Sequence: TCATATGTCTTATATAAGACAGATGT
Locus tag: bglu_2g08220
Name: sdhR
Funciton: Transcriptional regulator of TCA cycle, GntR family
Locus tag: bglu_2g08230
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: bglu_2g08240
Name: sdhD
Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: bglu_2g08250
Name: sdhA
Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: bglu_2g08260
Name: sdhB
Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: bglu_2g08270
Name: COG2938
Funciton: succinate dehydrogenase iron-sulfur subunit
Locus tag: bglu_2g08280
Name: gltA
Funciton: Citrate synthase (si) (EC 2.3.3.1)
sdhR-sdhC-sdhD-sdhA-sdhB-COG2938-gltA -69 7.4 TCATATGTCTTATATAAGACAGATGT bglu_2g08220
Burkholderia mallei ATCC 23344
Position: 119
Score: 7.46045
Sequence: TCTTATGTCTTATATAAGACAGATGT
Locus tag: BMAA1750
Name: sdhR
Funciton: Transcriptional regulator of TCA cycle, GntR family
Locus tag: BMAA1749
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: BMAA1748
Name: sdhD
Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: BMAA1747
Name: sdhA
Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: BMAA1746
Name: sdhB
Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: BMAA1745
Name: COG2938
Funciton: succinate dehydrogenase iron-sulfur subunit
Locus tag: BMAA1744
Name: gltA
Funciton: Citrate synthase (si) (EC 2.3.3.1)
sdhR-sdhC-sdhD-sdhA-sdhB-COG2938-gltA 119 7.5 TCTTATGTCTTATATAAGACAGATGT BMAA1750
Burkholderia phymatum STM815
Position: -78
Score: 7.56775
Sequence: TCTTATGTCTTATATAAGACATAACT
Locus tag: Bphy_4360
Name: sdhR
Funciton: Transcriptional regulator of TCA cycle, GntR family
Locus tag: Bphy_4361
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Bphy_4362
Name: sdhD
Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Bphy_4363
Name: sdhA
Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Bphy_4364
Name: sdhB
Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Bphy_4365
Name: COG2938
Funciton: succinate dehydrogenase iron-sulfur subunit
Locus tag: Bphy_4366
Name: gltA
Funciton: Citrate synthase (si) (EC 2.3.3.1)
sdhR-sdhC-sdhD-sdhA-sdhB-COG2938-gltA -78 7.6 TCTTATGTCTTATATAAGACATAACT Bphy_4360
Burkholderia pseudomallei K96243
Position: -79
Score: 7.46045
Sequence: TCTTATGTCTTATATAAGACAGATGT
Locus tag: BPSS1721
Name: sdhR
Funciton: Transcriptional regulator of TCA cycle, GntR family
Locus tag: BPSS1720
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: BPSS1719
Name: sdhD
Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: BPSS1718
Name: sdhA
Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: BPSS1717
Name: sdhB
Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: BPSS1716
Name: COG2938
Funciton: succinate dehydrogenase iron-sulfur subunit
Locus tag: BPSS1715
Name: gltA
Funciton: Citrate synthase (si) (EC 2.3.3.1)
sdhR-sdhC-sdhD-sdhA-sdhB-COG2938-gltA -79 7.5 TCTTATGTCTTATATAAGACAGATGT BPSS1721
Burkholderia sp. 383
Position: -69
Score: 7.3786
Sequence: TCATATGTCTTATATAAGACAGATGT
Locus tag: Bcep18194_B2153
Name: sdhR
Funciton: Transcriptional regulator of TCA cycle, GntR family
Locus tag: Bcep18194_B2152
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Bcep18194_B2151
Name: sdhD
Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Bcep18194_B2150
Name: sdhA
Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Bcep18194_B2149
Name: sdhB
Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Bcep18194_B2148
Name: COG2938
Funciton: succinate dehydrogenase iron-sulfur subunit
Locus tag: Bcep18194_B2147
Name: gltA
Funciton: Citrate synthase (si) (EC 2.3.3.1)
sdhR-sdhC-sdhD-sdhA-sdhB-COG2938-gltA -69 7.4 TCATATGTCTTATATAAGACAGATGT Bcep18194_B2153
Burkholderia vietnamiensis G4
Position: -69
Score: 7.3786
Sequence: TCATATGTCTTATATAAGACAGATGT
Locus tag: Bcep1808_4409
Name: sdhR
Funciton: Transcriptional regulator of TCA cycle, GntR family
Locus tag: Bcep1808_4410
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Bcep1808_4411
Name: sdhD
Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Bcep1808_4412
Name: sdhA
Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Bcep1808_4413
Name: sdhB
Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Bcep1808_4414
Name: COG2938
Funciton: succinate dehydrogenase iron-sulfur subunit
Locus tag: Bcep1808_4415
Name: gltA
Funciton: Citrate synthase (si) (EC 2.3.3.1)
sdhR-sdhC-sdhD-sdhA-sdhB-COG2938-gltA -69 7.4 TCATATGTCTTATATAAGACAGATGT Bcep1808_4409
Burkholderia xenovorans LB400
Position: -78
Score: 7.56775
Sequence: TCTTATGTCTTATATAAGACATAACT
Locus tag: Bxe_B2896
Name: sdhR
Funciton: Transcriptional regulator of TCA cycle, GntR family
Locus tag: Bxe_B2895
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Bxe_B2894
Name: sdhD
Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Bxe_B2893
Name: sdhA
Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Bxe_B2892
Name: sdhB
Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Bxe_B2891
Name: COG2938
Funciton: succinate dehydrogenase iron-sulfur subunit
Locus tag: Bxe_B2890
Name: gltA
Funciton: Citrate synthase (si) (EC 2.3.3.1)
sdhR-sdhC-sdhD-sdhA-sdhB-COG2938-gltA -78 7.6 TCTTATGTCTTATATAAGACATAACT Bxe_B2896
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