Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing metR gene

Properties
Regulog: MetR - Pseudomonadaceae
Regulator type: Transcription factor
Regulator family: LysR
Regulation mode: repressor (activator)
Biological process: Methionine biosynthesis
Effector: Homocysteine
Phylum: Proteobacteria/Gamma
Built upon 44 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Azotobacter vinelandii AvOP
Position: -58
Score: 4.94923
Sequence: CATGAGACAAACTCAGA
Locus tag: Avin_13970
Name: metR
Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
metR -58 4.9 CATGAGACAAACTCAGA Avin_13970
Pseudomonas aeruginosa PAO1
Position: -59
Score: 4.93711
Sequence: TATGAGACAAACTCAAC
Locus tag: PA3587
Name: metR
Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
metR -59 4.9 TATGAGACAAACTCAAC PA3587
Pseudomonas entomophila L48
Position: -57
Score: 4.8446
Sequence: CATGAGGGAAACTCAAC
Position: 17
Score: 3.83443
Sequence: CCTGAAAACCCTTCATG
Locus tag: PSEEN1184
Name: metR
Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
metR -57 4.8 CATGAGGGAAACTCAAC PSEEN1184
17 3.8 CCTGAAAACCCTTCATG
Pseudomonas fluorescens Pf-5
Position: -57
Score: 5.22145
Sequence: CATGAGACAAACTCAAC
Position: -26
Score: 3.79305
Sequence: CACAAAATTTACTCATG
Locus tag: PFL_4890
Name: metR
Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
metR -57 5.2 CATGAGACAAACTCAAC PFL_4890
-26 3.8 CACAAAATTTACTCATG
Pseudomonas mendocina ymp
Position: -115
Score: 4.88928
Sequence: AGTGAGACAAACTCAAG
Position: -84
Score: 3.84182
Sequence: CTAAAGATTTACTCATG
Locus tag: Pmen_1682
Name: metR
Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
metR -115 4.9 AGTGAGACAAACTCAAG Pmen_1682
-84 3.8 CTAAAGATTTACTCATG
Pseudomonas putida KT2440
Position: -76
Score: 3.93143
Sequence: TGTGAAATAACTTCAAT
Position: -66
Score: 4.07584
Sequence: CTTCAATATCATTCATG
Locus tag: PP2699
Name: PF08908
Funciton: Protein of unknown function DUF1852
Locus tag: PP2698
Name: metE2
Funciton: Methionine synthase II, vitamin-B12 independent (EC 2.1.1.14)
Locus tag: PP2697
Name: PF01613
Funciton: Flavin reductase-like, FMN-binding
Locus tag: PP2696
Name: metR
Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
PF08908-metE2-PF01613-metR -76 3.9 TGTGAAATAACTTCAAT PP2699
-66 4.1 CTTCAATATCATTCATG
Pseudomonas stutzeri A1501
Position: -89
Score: 4.38781
Sequence: GATGAGCCTCGCTCATC
Locus tag: PST_2852
Name: metR
Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
metR -89 4.4 GATGAGCCTCGCTCATC PST_2852
Pseudomonas syringae pv. tomato str. DC3000
Position: -59
Score: 5.49577
Sequence: CATGAGACAAACTCATT
Locus tag: PSPTO4180
Name: metR
Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
metR -59 5.5 CATGAGACAAACTCATT PSPTO4180
© 2009-2020 RegPrecise