Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing COG0348 gene

Properties
Regulog: YdcR - Pseudomonadaceae
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode:
Biological process:
Effector:
Phylum: Proteobacteria/Gamma
Built upon 10 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Pseudomonas entomophila L48
Position: -98
Score: 8.54989
Sequence: ATCTGATATGGTTTT-(9)-ACCTGAGTCTGTGCT
Locus tag: PSEEN2987
Name: COG0348
Funciton: Polyferredoxin
Locus tag: PSEEN2988
Name: ydcR
Funciton: Transcriptional regulator, GntR family
COG0348-ydcR -98 8.5 ATCTGATATGGTTTT-(9)-ACCTGAGTCTGTGCT PSEEN2987
Pseudomonas fluorescens Pf-5
Position: -97
Score: 9.43236
Sequence: ATCTGATCCGGTTTT-(9)-ACCTGAGTCTGTTAT
Locus tag: PFL_2869
Name: COG0348
Funciton: Polyferredoxin
Locus tag: PFL_2868
Name: ydcR
Funciton: Transcriptional regulator, GntR family
COG0348-ydcR -97 9.4 ATCTGATCCGGTTTT-(9)-ACCTGAGTCTGTTAT PFL_2869
Pseudomonas mendocina ymp
Position: -99
Score: 9.00965
Sequence: ATCTGATCCGCTTTT-(9)-ACCTGAGTCTGTTTT
Locus tag: Pmen_3094
Name: COG0348
Funciton: Polyferredoxin
Locus tag: Pmen_3095
Name: ydcR
Funciton: Transcriptional regulator, GntR family
COG0348-ydcR -99 9 ATCTGATCCGCTTTT-(9)-ACCTGAGTCTGTTTT Pmen_3094
Pseudomonas putida KT2440
Position: -98
Score: 8.7785
Sequence: ATCTGATATGGTTTT-(9)-ATCTGAACCTGTGCT
Locus tag: PP3543
Name: COG0348
Funciton: Polyferredoxin
Locus tag: PP3544
Name: ydcR
Funciton: Transcriptional regulator, GntR family
COG0348-ydcR -98 8.8 ATCTGATATGGTTTT-(9)-ATCTGAACCTGTGCT PP3543
Pseudomonas stutzeri A1501
Position: -97
Score: 8.76249
Sequence: ATCTGATCCGTATTT-(9)-ATCTGAGTCTGTTAT
Locus tag: PST_2730
Name: COG0348
Funciton: Polyferredoxin
Locus tag: PST_2731
Name: ydcR
Funciton: Transcriptional regulator, GntR family
COG0348-ydcR -97 8.8 ATCTGATCCGTATTT-(9)-ATCTGAGTCTGTTAT PST_2730