Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing sdaA gene

Properties
Regulog: GcvR - Pseudomonadales
Regulator type: Transcription factor
Regulator family: TyrR
Regulation mode: activator
Biological process: Glycine metabolism
Effector: Glycine
Phylum: Proteobacteria/Gamma
Built upon 20 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Azotobacter vinelandii AvOP
Position: -250
Score: 5.25009
Sequence: TCGTAACGATTTCGAAACAA
Position: -180
Score: 5.71961
Sequence: CCGTAACGATTTCGTTCCGA
Locus tag: Avin_26020
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
Locus tag: Avin_26040
Name: sdaA
Funciton: L-serine dehydratase (EC 4.3.1.17)
Locus tag: Avin_26050
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
gcvP-sdaA-gcvT -250 5.3 TCGTAACGATTTCGAAACAA Avin_26020
-180 5.7 CCGTAACGATTTCGTTCCGA
Pseudomonas aeruginosa PAO1
Position: -264
Score: 4.3521
Sequence: CTGTAACGCTTCGGTTACGA
Position: -244
Score: 5.61985
Sequence: GTGGAACGAATTCGTTCCGA
Position: -163
Score: 5.44855
Sequence: CTGTAACGAAAGCGTTCCAT
Locus tag: PA2446
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: PA2445
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
Locus tag: PA2444
Name: glyA
Funciton: Serine hydroxymethyltransferase (EC 2.1.2.1)
Locus tag: PA2443
Name: sdaA
Funciton: L-serine dehydratase (EC 4.3.1.17)
Locus tag: PA2442
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
gcvH-gcvP-glyA-sdaA-gcvT -264 4.4 CTGTAACGCTTCGGTTACGA PA2446
-244 5.6 GTGGAACGAATTCGTTCCGA
-163 5.4 CTGTAACGAAAGCGTTCCAT
Pseudomonas entomophila L48
Position: -265
Score: 5.35063
Sequence: CCGTATCGAATTCAATCCAC
Position: -246
Score: 4.63074
Sequence: CCGTAATCAAATCATTCCAC
Position: -165
Score: 5.67398
Sequence: GTGTATCGATTTCGTTCCAT
Locus tag: PSEEN4435
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: PSEEN4436
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
Locus tag: PSEEN4437
Name: sdaA
Funciton: L-serine dehydratase (EC 4.3.1.17)
Locus tag: PSEEN4438
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
gcvH-gcvP-sdaA-gcvT -265 5.4 CCGTATCGAATTCAATCCAC PSEEN4435
-246 4.6 CCGTAATCAAATCATTCCAC
-165 5.7 GTGTATCGATTTCGTTCCAT
Pseudomonas fluorescens Pf-5
Position: -280
Score: 4.96596
Sequence: CTGTACTGAAAGCGCTACAG
Position: -261
Score: 5.73571
Sequence: GTGGAACGATTTCGCTACAA
Position: -180
Score: 5.5213
Sequence: CTGTAGCGTTTTCGCTACGG
Locus tag: PFL_4640
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: PFL_4641
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
Locus tag: PFL_4642
Name: sdaA
Funciton: L-serine dehydratase (EC 4.3.1.17)
Locus tag: PFL_4643
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
gcvH-gcvP-sdaA-gcvT -280 5 CTGTACTGAAAGCGCTACAG PFL_4640
-261 5.7 GTGGAACGATTTCGCTACAA
-180 5.5 CTGTAGCGTTTTCGCTACGG
Pseudomonas putida KT2440
Position: -266
Score: 5.16954
Sequence: ATGTATCGTTTTCGCTACGT
Position: -247
Score: 5.36584
Sequence: TCGTAGCGAAAACGATACAC
Position: -166
Score: 5.66033
Sequence: CTGTAACGATATCATTCCAC
Locus tag: PP0989
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: PP0988
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
Locus tag: PP0987
Name: sdaA
Funciton: L-serine dehydratase (EC 4.3.1.17)
Locus tag: PP0986
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
gcvH-gcvP-sdaA-gcvT -266 5.2 ATGTATCGTTTTCGCTACGT PP0989
-247 5.4 TCGTAGCGAAAACGATACAC
-166 5.7 CTGTAACGATATCATTCCAC
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