Orthologous regulated operons containing colA3 gene
| Regulog: | HypR - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | activator (repressor) |
| Biological process: | Proline and 4-hydrohyproline utilization |
| Effector: | Proline; 4-hydroxyproline |
| Phylum: | Proteobacteria/gamma |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Shewanella halifaxensis HAW-EB4 | ||||
|
Position: -170
Score: 4.48992 Sequence: ATTGTATAAATT
Locus tag: Shal_2840
Name: colA3 Funciton: Microbial collagenase, secreted (EC 3.4.24.3) |
||||
| colA3 | -170 | 4.5 | ATTGTATAAATT | Shal_2840 |
| Shewanella loihica PV-4 | ||||
|
Position: -159
Score: 4.94466 Sequence: ATTGTATAAAAT
Locus tag: Shew_1685
Name: colA3 Funciton: Microbial collagenase, secreted (EC 3.4.24.3) |
||||
| colA3 | -159 | 4.9 | ATTGTATAAAAT | Shew_1685 |
| Shewanella pealeana ATCC 700345 | ||||
|
Position: -160
Score: 4.48992 Sequence: ATTGTATAAATT
Locus tag: Spea_2754
Name: colA3 Funciton: Microbial collagenase, secreted (EC 3.4.24.3) |
||||
| colA3 | -160 | 4.5 | ATTGTATAAATT | Spea_2754 |
| Shewanella piezotolerans WP3 | ||||
|
Position: -359
Score: 4.1801 Sequence: ATTGCATAAATT
Position: -216
Score: 3.39332 Sequence: ATTGGAGTCAAT
Locus tag: swp_3353
Name: colA3 Funciton: Microbial collagenase, secreted (EC 3.4.24.3) |
||||
| colA3 | -359 | 4.2 | ATTGCATAAATT | swp_3353 |
| -216 | 3.4 | ATTGGAGTCAAT | ||