Orthologous regulated operons containing hypO gene

Properties
Regulog:	HypR - Shewanellaceae
Regulator type:	Transcription factor
Regulator family:	GntR/Others
Regulation mode:	activator (repressor)
Biological process:	Proline and 4-hydrohyproline utilization
Effector:	Proline; 4-hydroxyproline
Phylum:	Proteobacteria/gamma

Built upon 96 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -106 Score: 5.32149 Sequence: ATTGTATACAAT Position: -33 Score: 4.55693 Sequence: ATTGCATACATT Locus tag: Sama_1532 Name: hypE2 Funciton: Proline racemase /4-hydroxyproline epimerase (EC 5.1.1.8) Locus tag: Sama_1533 Name: hypO Funciton: D-amino acid dehydrogenase (EC 1.4.99.1) family protein in hydroxy-L-proline catabolic cluster
hypE2-hypO	-106	5.3	ATTGTATACAAT	Sama_1532
	-33	4.6	ATTGCATACATT
Shewanella halifaxensis HAW-EB4
Position: 14 Score: 3.86645 Sequence: ATTGTATACGCA Position: 95 Score: 5.32149 Sequence: ATTGTATACAAT Locus tag: Shal_2554 Name: hypE2 Funciton: Proline racemase /4-hydroxyproline epimerase (EC 5.1.1.8) Locus tag: Shal_2553 Name: hypO Funciton: D-amino acid dehydrogenase (EC 1.4.99.1) family protein in hydroxy-L-proline catabolic cluster
hypE2-hypO	14	3.9	ATTGTATACGCA	Shal_2554
	95	5.3	ATTGTATACAAT
Shewanella loihica PV-4
Position: -118 Score: 5.32149 Sequence: ATTGTATACAAT Position: -32 Score: 4.87792 Sequence: ATTGCATACAAA Locus tag: Shew_2361 Name: hypE2 Funciton: Proline racemase /4-hydroxyproline epimerase (EC 5.1.1.8) Locus tag: Shew_2360 Name: hypO Funciton: D-amino acid dehydrogenase (EC 1.4.99.1) family protein in hydroxy-L-proline catabolic cluster
hypE2-hypO	-118	5.3	ATTGTATACAAT	Shew_2361
	-32	4.9	ATTGCATACAAA
Shewanella pealeana ATCC 700345
Position: -124 Score: 3.86645 Sequence: ATTGTATACGCA Position: -43 Score: 5.32149 Sequence: ATTGTATACAAT Locus tag: Spea_1705 Name: hypE2 Funciton: Proline racemase /4-hydroxyproline epimerase (EC 5.1.1.8) Locus tag: Spea_1706 Name: hypO Funciton: D-amino acid dehydrogenase (EC 1.4.99.1) family protein in hydroxy-L-proline catabolic cluster
hypE2-hypO	-124	3.9	ATTGTATACGCA	Spea_1705
	-43	5.3	ATTGTATACAAT
Shewanella piezotolerans WP3
Position: -112 Score: 3.2827 Sequence: ATTGTATACGCG Position: -41 Score: 5.32149 Sequence: ATTGTATACAAT Locus tag: swp_1985 Name: hypE2 Funciton: Proline racemase /4-hydroxyproline epimerase (EC 5.1.1.8) Locus tag: swp_1986 Name: hypO Funciton: D-amino acid dehydrogenase (EC 1.4.99.1) family protein in hydroxy-L-proline catabolic cluster
hypE2-hypO	-112	3.3	ATTGTATACGCG	swp_1985
	-41	5.3	ATTGTATACAAT
Shewanella sediminis HAW-EB3
Position: -105 Score: 5.32149 Sequence: ATTGTATACAAT Position: -32 Score: 4.87792 Sequence: ATTGCATACAAA Locus tag: Ssed_1763 Name: hypE2 Funciton: Proline racemase /4-hydroxyproline epimerase (EC 5.1.1.8) Locus tag: Ssed_1764 Name: hypO Funciton: D-amino acid dehydrogenase (EC 1.4.99.1) family protein in hydroxy-L-proline catabolic cluster
hypE2-hypO	-105	5.3	ATTGTATACAAT	Ssed_1763
	-32	4.9	ATTGCATACAAA
Shewanella woodyi ATCC 51908
Position: -106 Score: 5.32149 Sequence: ATTGTATACAAT Position: -32 Score: 4.87792 Sequence: ATTGCATACAAA Locus tag: Swoo_2821 Name: hypE2 Funciton: Proline racemase /4-hydroxyproline epimerase (EC 5.1.1.8) Locus tag: Swoo_2820 Name: hypO Funciton: D-amino acid dehydrogenase (EC 1.4.99.1) family protein in hydroxy-L-proline catabolic cluster
hypE2-hypO	-106	5.3	ATTGTATACAAT	Swoo_2821
	-32	4.9	ATTGCATACAAA

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Orthologous regulated operons containing hypO gene

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --