Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing gabD gene

Properties
Regulog: GabR - Burkholderia
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode:
Biological process: Gamma-aminobutyrate utilization
Effector: Gamma-aminobutyric acid
Phylum: Proteobacteria/Beta
Built upon 16 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Burkholderia cepacia AMMD
Position: -66
Score: 11.9334
Sequence: TTGGCTC-(16)-ATGGCTC-(9)-GAGCCAA
Locus tag: Bamb_4711
Name: gabT
Funciton: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
Locus tag: Bamb_4712
Name: gabD
Funciton: Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16)
gabT-gabD -66 11.9 TTGGCTC-(16)-ATGGCTC-(9)-GAGCCAA Bamb_4711
Burkholderia glumae BGR1
Position: -127
Score: 11.9334
Sequence: TTGGCTC-(16)-ATGGCTC-(9)-GAGCCAA
Locus tag: bglu_2g03380
Name: gabT
Funciton: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
Locus tag: bglu_2g03370
Name: gabD
Funciton: Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16)
gabT-gabD -127 11.9 TTGGCTC-(16)-ATGGCTC-(9)-GAGCCAA bglu_2g03380
Burkholderia mallei ATCC 23344
Position: -139
Score: 11.9334
Sequence: TTGGCTC-(16)-ATGGCTC-(9)-GAGCCAA
Locus tag: BMAA1480
Name: gabT
Funciton: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
Locus tag: BMAA1481
Name: gabD
Funciton: Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16)
gabT-gabD -139 11.9 TTGGCTC-(16)-ATGGCTC-(9)-GAGCCAA BMAA1480
Burkholderia phymatum STM815
Position: -143
Score: 10.8175
Sequence: ATGGCTC-(16)-GTGGCTC-(9)-GAGCCGT
Locus tag: Bphy_4851
Name: gabT
Funciton: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
Locus tag: Bphy_4850
Name: gabD
Funciton: Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16)
gabT-gabD -143 10.8 ATGGCTC-(16)-GTGGCTC-(9)-GAGCCGT Bphy_4851
Burkholderia pseudomallei K96243
Position: -139
Score: 11.9334
Sequence: TTGGCTC-(16)-ATGGCTC-(9)-GAGCCAA
Locus tag: BPSS0281
Name: gabT
Funciton: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
Locus tag: BPSS0280
Name: gabD
Funciton: Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16)
gabT-gabD -139 11.9 TTGGCTC-(16)-ATGGCTC-(9)-GAGCCAA BPSS0281
Burkholderia sp. 383
Position: -118
Score: 11.9334
Sequence: TTGGCTC-(16)-ATGGCTC-(9)-GAGCCAA
Locus tag: Bcep18194_B0280
Name: gabT
Funciton: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
Locus tag: Bcep18194_B0279
Name: gabD
Funciton: Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16)
gabT-gabD -118 11.9 TTGGCTC-(16)-ATGGCTC-(9)-GAGCCAA Bcep18194_B0280
Burkholderia vietnamiensis G4
Position: -124
Score: 11.9334
Sequence: TTGGCTC-(16)-ATGGCTC-(9)-GAGCCAA
Locus tag: Bcep1808_3589
Name: gabT
Funciton: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
Locus tag: Bcep1808_3590
Name: gabD
Funciton: Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16)
gabT-gabD -124 11.9 TTGGCTC-(16)-ATGGCTC-(9)-GAGCCAA Bcep1808_3589
Burkholderia xenovorans LB400
Position: -114
Score: 11.9334
Sequence: TTGGCTC-(16)-ATGGCTC-(9)-GAGCCAA
Locus tag: Bxe_B0834
Name: gabT
Funciton: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
Locus tag: Bxe_B0833
Name: gabD
Funciton: Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16)
gabT-gabD -114 11.9 TTGGCTC-(16)-ATGGCTC-(9)-GAGCCAA Bxe_B0834
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