Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing prpB2 gene

Properties
Regulog: PrpR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Methylcitrate utilization
Effector: 2-methylcitrate
Phylum: Proteobacteria/gamma
Built upon 48 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella baltica OS155
Position: -204
Score: 5.1775
Sequence: ATTGTTGACAAT
Position: -73
Score: 5.1775
Sequence: ATTGTTGACAAT
Position: -34
Score: 5.86661
Sequence: ATTGTCGACAAT
Locus tag: Sbal_4046
Name: prpR
Funciton: Propionate catabolism operon transcriptional regulator of GntR family
Locus tag: Sbal_4047
Name: prpB
Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: Sbal_4048
Name: prpC
Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
Locus tag: Sbal_4049
Name: acnD
Funciton: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
Locus tag: Sbal_4050
Name: prpF
Funciton: Aconitase accessory protein PrpF
Locus tag: Sbal_4051
Name: prpB2
Funciton: Methylisocitrate lyase (EC 4.1.3.30)
prpR-prpB-prpC-acnD-prpF-prpB2 -204 5.2 ATTGTTGACAAT Sbal_4046
-73 5.2 ATTGTTGACAAT
-34 5.9 ATTGTCGACAAT
Shewanella sp W3-18-1
Position: -204
Score: 5.1775
Sequence: ATTGTTGACAAT
Position: -73
Score: 5.1775
Sequence: ATTGTTGACAAT
Position: -34
Score: 5.86661
Sequence: ATTGTCGACAAT
Locus tag: Sputw3181_3783
Name: prpR
Funciton: Propionate catabolism operon transcriptional regulator of GntR family
Locus tag: Sputw3181_3784
Name: prpB
Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: Sputw3181_3785
Name: prpC
Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
Locus tag: Sputw3181_3786
Name: acnD
Funciton: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
Locus tag: Sputw3181_3787
Name: prpF
Funciton: Aconitase accessory protein PrpF
Locus tag: Sputw3181_3788
Name: prpB2
Funciton: Methylisocitrate lyase (EC 4.1.3.30)
prpR-prpB-prpC-acnD-prpF-prpB2 -204 5.2 ATTGTTGACAAT Sputw3181_3783
-73 5.2 ATTGTTGACAAT
-34 5.9 ATTGTCGACAAT