Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing edd gene

Properties
Regulog: CceR (GapR) - Rhodobacterales
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode:
Biological process: Central carbohydrate metabolism
Effector: 6-phosphogluconate
Phylum: Proteobacteria/Alpha
Built upon 177 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Jannaschia sp. CCS1
Position: -55
Score: 5.83603
Sequence: ACATGTTAGCGCTAACATGA
Locus tag: Jann_1953
Name: edd
Funciton: Phosphogluconate dehydratase (EC 4.2.1.12)
edd -55 5.8 ACATGTTAGCGCTAACATGA Jann_1953
Loktanella vestfoldensis SKA53
Position: -58
Score: 5.57412
Sequence: CCTTGTTAGCGCTAACACAA
Locus tag: SKA53_05488
Name: edd
Funciton: Phosphogluconate dehydratase (EC 4.2.1.12)
edd -58 5.6 CCTTGTTAGCGCTAACACAA SKA53_05488
Oceanicola batsensis HTCC2597
Position: -54
Score: 5.241
Sequence: CATTGTTACCGCTAACAAAG
Locus tag: OB2597_02267
Name: edd
Funciton: Phosphogluconate dehydratase (EC 4.2.1.12)
Locus tag: OB2597_02272
Name: eda
Funciton: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
edd-eda -54 5.2 CATTGTTACCGCTAACAAAG OB2597_02267
Oceanicola granulosus HTCC2516
Position: -62
Score: 5.48613
Sequence: GGTTGTTAGCGGTAACGGCC
Locus tag: OG2516_00150
Name: edd
Funciton: Phosphogluconate dehydratase (EC 4.2.1.12)
edd -62 5.5 GGTTGTTAGCGGTAACGGCC OG2516_00150
Paracoccus denitrificans PD1222
Position: -48
Score: 5.42184
Sequence: CAATGTTACCGCTAACAGGA
Locus tag: Pden_1955
Name: edd
Funciton: Phosphogluconate dehydratase (EC 4.2.1.12)
edd -48 5.4 CAATGTTACCGCTAACAGGA Pden_1955
Rhodobacterales bacterium HTCC2654
Position: -65
Score: 5.22499
Sequence: GGTTGTTAGCGCTATCACGA
Locus tag: RB2654_03494
Name: edd
Funciton: Phosphogluconate dehydratase (EC 4.2.1.12)
Locus tag: RB2654_03489
Name: eda
Funciton: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
edd-eda -65 5.2 GGTTGTTAGCGCTATCACGA RB2654_03494
Roseobacter sp. MED193
Position: -77
Score: 4.98119
Sequence: TACCGTTATCGCTAACAGTA
Locus tag: MED193_17414
Name: pgi
Funciton: Glucose-6-phosphate isomerase (EC 5.3.1.9)
Locus tag: MED193_17419
Name: zwf
Funciton: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
Locus tag: MED193_17424
Name: edd
Funciton: Phosphogluconate dehydratase (EC 4.2.1.12)
pgi-zwf-edd -77 5 TACCGTTATCGCTAACAGTA MED193_17414
Silicibacter TM1040
Position: -130
Score: 3.80473
Sequence: GCAAGTTTGCGAAAATTTGG
Position: -98
Score: 5.52393
Sequence: CATTGTTAGCGCTAACTTGG
Locus tag: TM1040_0378
Name: pgi
Funciton: Glucose-6-phosphate isomerase (EC 5.3.1.9)
Locus tag: TM1040_0377
Name: zwf
Funciton: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
Locus tag: TM1040_0376
Name: edd
Funciton: Phosphogluconate dehydratase (EC 4.2.1.12)
Locus tag: TM1040_0375
Name: eda
Funciton: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
pgi-zwf-edd-eda -130 3.8 GCAAGTTTGCGAAAATTTGG TM1040_0378
-98 5.5 CATTGTTAGCGCTAACTTGG
Silicibacter pomeroyi DSS-3
Position: -65
Score: 5.49325
Sequence: ACATGTTAGCGGTAACATTG
Locus tag: SPO3033
Name: zwf
Funciton: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
Locus tag: SPO3032
Name: edd
Funciton: Phosphogluconate dehydratase (EC 4.2.1.12)
Locus tag: SPO3031
Name: eda
Funciton: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
zwf-edd-eda -65 5.5 ACATGTTAGCGGTAACATTG SPO3033
Sulfitobacter sp. EE-36
Position: -74
Score: 5.56099
Sequence: ATAAGTTAGCGCTAACATAC
Locus tag: EE36_09240
Name: edd
Funciton: Phosphogluconate dehydratase (EC 4.2.1.12)
Locus tag: EE36_09245
Name: eda
Funciton: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
edd-eda -74 5.6 ATAAGTTAGCGCTAACATAC EE36_09240
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