Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing gapB gene

Properties
Regulog: CceR (GapR) - Rhodobacterales
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode:
Biological process: Central carbohydrate metabolism
Effector: 6-phosphogluconate
Phylum: Proteobacteria/Alpha
Built upon 177 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Jannaschia sp. CCS1
Position: -63
Score: 5.35933
Sequence: CCCTGTTACCGCTAACACAC
Locus tag: Jann_1695
Name: gapB
Funciton: Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
gapB -63 5.4 CCCTGTTACCGCTAACACAC Jann_1695
Loktanella vestfoldensis SKA53
Position: -40
Score: 5.59433
Sequence: CAATGTTAGCGCCAACATTC
Locus tag: SKA53_02871
Name: gapB
Funciton: Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
gapB -40 5.6 CAATGTTAGCGCCAACATTC SKA53_02871
Oceanicola batsensis HTCC2597
Position: -49
Score: 5.21079
Sequence: CTATGTTAGCGTTAACGGAC
Locus tag: OB2597_01282
Name: gapB
Funciton: Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
gapB -49 5.2 CTATGTTAGCGTTAACGGAC OB2597_01282
Paracoccus denitrificans PD1222
Position: -124
Score: 3.95415
Sequence: CAATTGCACCGCTAACATCG
Locus tag: Pden_4465
Name: gapB
Funciton: Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
gapB -124 4 CAATTGCACCGCTAACATCG Pden_4465
Rhodobacterales bacterium HTCC2654
Position: -91
Score: 5.40784
Sequence: TGATGTTAGCGGTAACGGCG
Locus tag: RB2654_02419
Name: gapB
Funciton: Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
gapB -91 5.4 TGATGTTAGCGGTAACGGCG RB2654_02419
Roseobacter sp. MED193
Position: -110
Score: 3.96176
Sequence: CTCCGTTATCGATACCGATA
Position: -88
Score: 4.93994
Sequence: TAATGTTAGCGATAACGAAT
Locus tag: MED193_10071
Name: gapB
Funciton: Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
gapB -110 4 CTCCGTTATCGATACCGATA MED193_10071
-88 4.9 TAATGTTAGCGATAACGAAT
Roseovarius sp. 217
Position: -35
Score: 5.65288
Sequence: AATTGTTAGCGCTAACATAT
Locus tag: ROS217_23127
Name: gapB
Funciton: Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
gapB -35 5.7 AATTGTTAGCGCTAACATAT ROS217_23127
Silicibacter TM1040
Position: -85
Score: 4.72164
Sequence: CTTCGTTAGCGATAACGATA
Position: -60
Score: 4.45989
Sequence: GAGTGATAGCGGTACCAGTG
Locus tag: TM1040_0417
Name: gapB
Funciton: Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
gapB -85 4.7 CTTCGTTAGCGATAACGATA TM1040_0417
-60 4.5 GAGTGATAGCGGTACCAGTG
Silicibacter pomeroyi DSS-3
Position: -59
Score: 5.46883
Sequence: TTTTGTTAGCGCTAACAAAT
Locus tag: SPO0701
Name: gapB
Funciton: Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
gapB -59 5.5 TTTTGTTAGCGCTAACAAAT SPO0701
Sulfitobacter sp. EE-36
Position: -35
Score: 5.34563
Sequence: CGATGTTAGCGCTATCAAAT
Locus tag: EE36_13578
Name: gapB
Funciton: Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
gapB -35 5.3 CGATGTTAGCGCTATCAAAT EE36_13578
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