Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing omp(Tre) gene

Properties
Regulog: TreR - Alteromonadales
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Trehalose utilization
Effector: Trehalose
Phylum: Proteobacteria/gamma
Built upon 16 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Colwellia psychrerythraea 34H
Position: -142
Score: 5.9052
Sequence: CAATGCAATCGATTGTAAAA
Position: -119
Score: 6.11775
Sequence: CCTTGCAATCGATTGCATTA
Locus tag: CPS_0977
Name: omp(Tre)
Funciton: Trehalose-regulated TonB-dependent outer membrane receptor
omp(Tre) -142 5.9 CAATGCAATCGATTGTAAAA CPS_0977
-119 6.1 CCTTGCAATCGATTGCATTA
Pseudoalteromonas atlantica T6c
Position: -88
Score: 6.41112
Sequence: AAATGCAAACGATTGCAAAA
Position: -64
Score: 6.41151
Sequence: AATTGCAATCGTTTGCATTT
Locus tag: Patl_1822
Name: omp(Tre)
Funciton: Trehalose-regulated TonB-dependent outer membrane receptor
omp(Tre) -88 6.4 AAATGCAAACGATTGCAAAA Patl_1822
-64 6.4 AATTGCAATCGTTTGCATTT
Pseudoalteromonas tunicata D2
Position: -124
Score: 6.41112
Sequence: AATTGCAAACGTTTGCATAA
Locus tag: PTD2_20302
Name: omp(Tre)
Funciton: Trehalose-regulated TonB-dependent outer membrane receptor
omp(Tre) -124 6.4 AATTGCAAACGTTTGCATAA PTD2_20302
© 2009-2020 RegPrecise